RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 COQ5Q5HYK3 327 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 DCST1Q5T197 706 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 RAET1LQ5VY80 246 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 CBLN3Q6UW01 205 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 EIF3MQ7L2H7 374 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 PM20D2Q8IYS1 436 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 PHF10Q8WUB8 498 aaKnown RBP17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 CGREF1Q99674 301 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 PIGQQ9BRB3 760 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 RUBCNLQ9H714 662 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 A4GALTQ9NPC4 353 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 ALKBH4Q9NXW9 302 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 ARMCX1Q9P291 453 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 CARD8Q9Y2G2 431 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 L3MBTL1Q9Y468 752 aa17.98■□□□□ 0.47
PDLIM2-207ENST00000409417 HECTD1Q9ULT8 2610 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 PCNX3Q9H6A9 2034 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 EVPLLA8MZ36 301 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 AHRRA9YTQ3 701 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 OIP5O43482 229 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 EIF4E2O60573 245 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 NUDT7P0C024 238 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 CPN1P15169 458 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 GPX2P18283 190 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 P2RX1P51575 399 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 ZNF41P51814 821 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 SUMO3P55854 103 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 NFYCQ13952 458 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 FGFBP1Q14512 234 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 TMEM44Q2T9K0 475 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 RUNDC3AQ59EK9 446 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 RPTNQ6XPR3 784 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 ULK2Q8IYT8 1036 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 WDYHV1Q96HA8 205 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 ANKRD27Q96NW4 1050 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 TREX2Q9BQ50 279 aaPredicted RBP17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 QRSL1Q9H0R6 528 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 IKZF5Q9H5V7 419 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 MED17Q9NVC6 651 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 FAM53CQ9NYF3 392 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 VDAC3Q9Y277 283 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 SLC35A3Q9Y2D2 325 aa17.97■□□□□ 0.47
PDLIM2-207ENST00000409417 C7orf72A4D263 438 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 BBIP1A8MTZ0 92 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 CSTAP01040 98 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 BCHEP06276 602 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 LHX2P50458 406 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 SKP2Q13309 424 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 CYLC2Q14093 348 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 NDUFAF6Q330K2 333 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 PRAMEF8Q5VWM4 474 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 PRAMEF7Q5VXH5 474 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 RTL6Q6ICC9 239 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 TMEM211Q6ICI0 200 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 MTDHQ86UE4 582 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 SNX32Q86XE0 403 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 GTPBP8Q8N3Z3 284 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 MARVELD2Q8N4S9 558 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 TOR1AIP2Q8NFQ8 470 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 OR5W2Q8NH69 310 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 MAL2Q969L2 176 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 ZBTB8AQ96BR9 441 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 CPPED1Q9BRF8 314 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 LAT2Q9GZY6 243 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 FAM215AQ9Y5M1 114 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 DSPPQ9NZW4 1301 aa17.96■□□□□ 0.47
PDLIM2-207ENST00000409417 LOC100653049A0A140TA62 436 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 OR2M5A3KFT3 312 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 FAM47E-STBD1D6RA91 191 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 KRT34O76011 436 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 NPPAP01160 153 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF17P17021 662 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 RPS4Y1P22090 263 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 STARP49675 285 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 KCNJ10P78508 379 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ADORA2A-AS1P86434 159 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 SF3B4Q15427 424 aaKnown RBP eCLIP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 BCL2A1Q16548 175 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 TRMT5Q32P41 509 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 PLPPR5Q32ZL2 321 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 MMEL1Q495T6 779 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 GCNT6Q5T4J0 391 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 B3GNT6Q6ZMB0 384 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 HMGN2P46Q86SG4 172 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 CMIPQ8IY22 773 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 C10orf111Q8N326 155 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 RPRMLQ8N4K4 120 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 FAM71CQ8NEG0 241 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 GPR119Q8TDV5 335 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ARSGQ96EG1 525 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 TMEM19Q96HH6 336 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 KLHDC3Q9BQ90 382 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 BCL2L10Q9HD36 194 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 CAMK2AQ9UQM7 478 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 ZNF337Q9Y3M9 751 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 A0A0G2JPF8 293 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 HNRNPCL2B2RXH8 293 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 HNRNPCL3B7ZW38 293 aa17.95■□□□□ 0.46
PDLIM2-207ENST00000409417 HNRNPCL1O60812 293 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms