RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 MGAT2Q10469 447 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 VEZF1Q14119 521 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ETFDHQ16134 617 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 GSTA3Q16772 222 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 PRSS53Q2L4Q9 553 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 TRMT12Q53H54 448 aaKnown RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 PPP4R4Q6NUP7 873 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 CPLX4Q7Z7G2 160 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 C10orf82Q8WW14 230 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 TMEM158Q8WZ71 300 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 EXOSC8Q96B26 276 aaKnown RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 MTERF3Q96E29 417 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF764Q96H86 408 aaPredicted RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ELAC2Q9BQ52 826 aaKnown RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 DPY30Q9C005 99 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 FAM107BQ9H098 131 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 MIEF1Q9NQG6 463 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF639Q9UID6 485 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 UTS2RQ9UKP6 389 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 GPR45Q9Y5Y3 372 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 SONP18583 2426 aaKnown RBP12.88□□□□□ -0.35
RAB1A-201ENST00000398529 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
RAB1A-201ENST00000398529 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 SCAMP2O15127 329 aaKnown RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 CBX7O95931 251 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 PRPS1L1P21108 318 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 IDUAP35475 653 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 RPL3P39023 403 aaKnown RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 EMDP50402 254 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 C21orf58P58505 322 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 TNK1Q13470 666 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 PDE7AQ13946 482 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 GANABQ14697 944 aaKnown RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 CLEC12BQ2HXU8 276 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 PDCD4Q53EL6 469 aaKnown RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF385BQ569K4 471 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 STK32CQ86UX6 486 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 RIMKLAQ8IXN7 391 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
RAB1A-201ENST00000398529 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF611Q8N823 705 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 FIG4Q92562 907 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 PPCDCQ96CD2 204 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 ERP27Q96DN0 273 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 PIGQQ9BRB3 760 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 RNF122Q9H9V4 155 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 SLC35C2Q9NQQ7 365 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 GIMAP4Q9NUV9 329 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
RAB1A-201ENST00000398529 H3BML4 177 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 HS3ST1O14792 307 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 TLX2O43763 284 aaPredicted RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 DDX5P17844 614 aaKnown RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 MRPL19P49406 292 aaKnown RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 NME5P56597 212 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 UFM1P61960 85 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 MRPS35P82673 323 aaKnown RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 PON3Q15166 354 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 METTL21CQ5VZV1 264 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 ANKRD26P1Q6NSI1 321 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 FAM180BQ6P0A1 224 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 OR7A2PQ8NGA2 310 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 FNDC9Q8TBE3 224 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 GTPBP3Q969Y2 492 aaKnown RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 CNRIP1Q96F85 164 aaPredicted RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 ZNF681Q96N22 645 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 BTBD9Q96Q07 612 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 DSN1Q9H410 356 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 RABEP2Q9H5N1 569 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
RAB1A-201ENST00000398529 TAS2R9Q9NYW1 312 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 SH3BP4Q9P0V3 963 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 TRIM33Q9UPN9 1127 aa12.86□□□□□ -0.35
RAB1A-201ENST00000398529 RNF223E7ERA6 249 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 SCO2O43819 266 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 SNX3O60493 162 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 TSPAN2O60636 221 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 CGAP01215 116 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 FESP07332 822 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 NID1P14543 1247 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 NCF2P19878 526 aaPredicted RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 CCKARP32238 428 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 ATP4BP51164 291 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 CLNS1AP54105 237 aaKnown RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 B3GALT5-AS1P59052 145 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 STX1BP61266 288 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 DUSP2Q05923 314 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 SQLEQ14534 574 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 LTB4RQ15722 352 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 CPTPQ5TA50 214 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
RAB1A-201ENST00000398529 WFDC8Q8IUA0 241 aa12.85□□□□□ -0.35
RAB1A-201ENST00000398529 SLC44A2Q8IWA5 706 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms