RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PRODH2Q9UF12 536 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MED31Q9Y3C7 131 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR10H1Q9Y4A9 318 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MMACHCQ9Y4U1 282 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 CORINQ9Y5Q5 1042 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MAU2Q9Y6X3 613 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 NCOR1O75376 2440 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 A0A0B4J2E0 115 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 A0A1B0GX12 115 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR2W5A6NFC9 320 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 CH25HO95992 272 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 HMGN1P05114 100 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 GLB1P16278 677 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 ENDOUP21128 410 aaKnown RBP13.82□□□□□ -0.2
CBX3-202ENST00000396386 MTNR1AP48039 350 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 LIMK1P53667 647 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 CDH11P55287 796 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 GPLD1P80108 840 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 BNC1Q01954 994 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 DMWDQ09019 674 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MLLT11Q13015 90 aaPredicted RBP13.82□□□□□ -0.2
CBX3-202ENST00000396386 NNATQ16517 81 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 RPL13AP3Q6NVV1 102 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 HSDL2Q6YN16 418 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 TTLL10Q6ZVT0 673 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 CDK20Q8IZL9 346 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 ZNF615Q8N8J6 731 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 RCBTB1Q8NDN9 531 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 GRHL3Q8TE85 626 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 HS6ST2Q96MM7 605 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR1F2PQ96R84 312 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 IER2Q9BTL4 223 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 TRIM2Q9C040 744 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR52D1Q9H346 318 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 HHATLQ9HCP6 504 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 LANCL2Q9NS86 450 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 CBLCQ9ULV8 474 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 B3GNT3Q9Y2A9 372 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 EXOSC1Q9Y3B2 195 aaKnown RBP13.82□□□□□ -0.2
CBX3-202ENST00000396386 SIT1Q9Y3P8 196 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 METTL15A6NJ78 407 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 NPIPB9F8W1W9 429 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 H3BMH7 237 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 KPNA4O00629 521 aaPredicted RBP13.81□□□□□ -0.2
CBX3-202ENST00000396386 CT45A8P0DMV1 189 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CT45A9P0DMV2 189 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 MAKP20794 623 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CSF2RBP32927 897 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 ATP12AP54707 1039 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 GAS1P54826 345 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CT45A2Q5DJT8 189 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 ZNF550Q7Z398 422 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 IGFN1Q86VF2 1251 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CMIPQ8IY22 773 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 SLC25A45Q8N413 288 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 OR7G1Q8NGA0 311 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 OR9Q1Q8NGQ5 310 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CENPOQ9BU64 300 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 CHCHD3Q9NX63 227 aaKnown RBP13.81□□□□□ -0.2
CBX3-202ENST00000396386 SIDT1Q9NXL6 827 aaKnown RBP13.81□□□□□ -0.2
CBX3-202ENST00000396386 FLRT3Q9NZU0 649 aa13.81□□□□□ -0.2
CBX3-202ENST00000396386 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
CBX3-202ENST00000396386 A0A1B0GWA3 101 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 C17orf105B2RV13 164 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 CLPSP04118 112 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 HBQ1P09105 142 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ETV5P41161 510 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 SOX3P41225 446 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 RBM34P42696 430 aaKnown RBP13.8□□□□□ -0.2
CBX3-202ENST00000396386 ETV1P50549 477 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 CTBP2P56545 445 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.8□□□□□ -0.2
CBX3-202ENST00000396386 C11orf91Q3C1V1 193 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ZNF404Q494X3 552 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 SNAP47Q5SQN1 464 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 AADACL4Q5VUY2 407 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 PAQR6Q6TCH4 344 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 TMPRSS11FQ6ZWK6 438 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 PRSS42Q7Z5A4 293 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 BMP8AQ7Z5Y6 402 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 D2HGDHQ8N465 521 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 MFSD4AQ8N468 514 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 BCORP1Q8N888 145 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
CBX3-202ENST00000396386 BPIFA2Q96DR5 249 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 PTCHD1Q96NR3 888 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 UBQLN3Q9H347 655 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ATP13A2Q9NQ11 1180 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 C20orf141Q9NUB4 165 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 NDUFB11Q9NX14 153 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 A3GALT2U3KPV4 340 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 GON4LQ3T8J9 2241 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 HYAL3O43820 417 aaPredicted RBP13.8□□□□□ -0.2
CBX3-202ENST00000396386 RCBTB2O95199 551 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ZGLP1P0C6A0 271 aa13.8□□□□□ -0.2
CBX3-202ENST00000396386 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms