RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CD40P25942 277 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 MRPS25P82663 173 aaKnown RBP15.26■□□□□ 0.03
HMGN1-203ENST00000380748 HEPACAMQ14CZ8 416 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 CCDC91Q7Z6B0 441 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 PLD6Q8N2A8 252 aaKnown RBP15.26■□□□□ 0.03
HMGN1-203ENST00000380748 OR52N5Q8NH56 324 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 FBF1Q8TES7 1133 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF775Q96BV0 537 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-203ENST00000380748 PSD2Q9BQI7 771 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 EBPLQ9BY08 206 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 COQ10BQ9H8M1 238 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF225Q9UK10 706 aa15.26■□□□□ 0.03
HMGN1-203ENST00000380748 EIF3HO15372 352 aaKnown RBP eCLIP15.25■□□□□ 0.03
HMGN1-203ENST00000380748 KCNH1O95259 989 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 PGM3O95394 542 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 OTCP00480 354 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 GSTA2P09210 222 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 LINGO3P0C6S8 592 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 PTAFRP25105 342 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 PRIM2P49643 509 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 CDH13P55290 713 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF544Q6NX49 715 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 ZAR1Q86SH2 424 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 P2RY8Q86VZ1 359 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 LRRC8AQ8IWT6 810 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF433Q8N7K0 673 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-203ENST00000380748 SGMS2Q8NHU3 365 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 FAM110BQ8TC76 370 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 APIPQ96GX9 242 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 FOXN4Q96NZ1 517 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 INPP5KQ9BT40 448 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 BCO1Q9HAY6 547 aa15.25■□□□□ 0.03
HMGN1-203ENST00000380748 A0A1W2PR80 420 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 NDUFS8O00217 210 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 MANBAO00462 879 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 RAD51DO75771 328 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 OR4F21O95013 312 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 VENTXO95231 258 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 RPS17P08708 135 aaKnown RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SRP14P37108 136 aaKnown RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 CHRNEQ04844 493 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SLC29A2Q14542 456 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 CARTPTQ16568 116 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 TMEM176BQ3YBM2 270 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 IQCCQ4KMZ1 466 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 GLE1Q53GS7 698 aaKnown RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SSX8Q7RTT4 187 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SLC43A2Q8N370 569 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF483Q8TF39 744 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 MRRFQ96E11 262 aaKnown RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 ZMYND19Q96E35 227 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 ELP4Q96EB1 424 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SORCS2Q96PQ0 1159 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF300Q96RE9 604 aaPredicted RBP15.24■□□□□ 0.03
HMGN1-203ENST00000380748 ACPTQ9BZG2 426 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 VPS11Q9H270 941 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 GLIPR2Q9H4G4 154 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 C3orf14Q9HBI5 128 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 EQTNQ9NQ60 294 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 KLHL9Q9P2J3 617 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 SLC25A15Q9Y619 301 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 PMF1-BGLAPU3KQ54 211 aa15.24■□□□□ 0.03
HMGN1-203ENST00000380748 M0R1B8 84 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 RGS14O43566 566 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 SLITRK5O94991 958 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 NGFRP08138 427 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 BMP4P12644 408 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 HSD3B1P14060 373 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF23P17027 643 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 HSD3B2P26439 372 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 ELK4P28324 431 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 TIA1P31483 386 aaKnown RBP eCLIP15.23■□□□□ 0.032e-6■■□□□ 12.1
HMGN1-203ENST00000380748 CHRNB3Q05901 458 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 CD226Q15762 336 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 KLHL17Q6TDP4 642 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 ATP6V1C2Q8NEY4 427 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 SEMA6DQ8NFY4 1073 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 B4GALNT2Q8NHY0 566 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 CDC26Q8NHZ8 85 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 GPR151Q8TDV0 419 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 DPH5Q9H2P9 285 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 FKBP7Q9Y680 259 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 ATP23Q9Y6H3 246 aa15.23■□□□□ 0.03
HMGN1-203ENST00000380748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.23■□□□□ 0.032e-11■■■■■ 38.2
HMGN1-203ENST00000380748 HEATR1Q9H583 2144 aaKnown RBP15.23■□□□□ 0.03
HMGN1-203ENST00000380748 LRP5LA4QPB2 252 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF195O14628 629 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 SMAD9O15198 467 aaKnown RBP15.22■□□□□ 0.03
HMGN1-203ENST00000380748 DDCP20711 480 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 STX2P32856 288 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 EIF1P41567 113 aaKnown RBP15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ACSM2AQ08AH3 577 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 NAB1Q13506 487 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ARL13AQ5H913 290 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ACSM2BQ68CK6 577 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 C3orf56Q8N813 242 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 FBXO27Q8NI29 283 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ZFP90Q8TF47 636 aa15.22■□□□□ 0.03
HMGN1-203ENST00000380748 ZNF75CPQ92670 426 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-203ENST00000380748 AMDHD1Q96NU7 426 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms