RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TRIM64BA6NI03 449 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 TMX2-CTNND1H3BSU7 103 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 POLR1CO15160 346 aaPredicted RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 CKMT1AP12532 417 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 DAB2P98082 770 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 EFNB1P98172 346 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 PRR23CQ6ZRP0 262 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 WDFY4Q6ZS81 3184 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 SHISA6Q6ZSJ9 500 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 BCDIN3DQ7Z5W3 292 aaKnown RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 RNF113BQ8IZP6 322 aaKnown RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 C7orf57Q8NEG2 295 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 TMEM239Q8WW34 195 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 NUDT9Q9BW91 350 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 GTPBP2Q9BX10 602 aaKnown RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 IL20Q9NYY1 176 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 FLRT3Q9NZU0 649 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF223Q9UK11 482 aaPredicted RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 EFCAB10A6NFE3 127 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 CDC42EP2O14613 210 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC15A1P46059 708 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 OCLNQ16625 522 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 UBE2UQ5VVX9 321 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 PWWP2BQ6NUJ5 590 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC16A12Q6ZSM3 486 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 FAM26EQ8N5C1 309 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 PFN4Q8NHR9 129 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 GRHL3Q8TE85 626 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 KRCC1Q9NPI7 259 aaPredicted RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 CNOT2Q9NZN8 540 aaKnown RBP18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 RARRES3Q9UL19 164 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 CFL2Q9Y281 166 aa18.3■□□□□ 0.52
PDLIM5-205ENST00000380180 MPDZO75970 2070 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 A0A0B4J2E0 115 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 A0A1B0GX12 115 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 A0A1W2PPW3 197 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 CCNA2P20248 432 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 NR4A1P22736 598 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 ST13P50502 369 aaKnown RBP18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 FOXL2P58012 376 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 TBCEQ15813 527 aaPredicted RBP18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 SNAPC1Q16533 368 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 ZSWIM7Q19AV6 140 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 CLEC12AQ5QGZ9 265 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 MRGPREQ86SM8 312 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 ANKRD13BQ86YJ7 626 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 ZFAND2BQ8WV99 257 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 DAZLQ92904 295 aaKnown RBP18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 ADIPOR1Q96A54 375 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 LCORQ96JN0 433 aaPredicted RBP18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 C20orf141Q9NUB4 165 aa18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM5-205ENST00000380180 SERINC4A6NH21 518 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 SCRG1O75711 98 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 ADRA2AP08913 450 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 OCA2Q04671 838 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 NDUFAF6Q330K2 333 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC25A30Q5SVS4 291 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 LANCL3Q6ZV70 420 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF550Q7Z398 422 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 CMIPQ8IY22 773 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 PLPP5Q8NEB5 264 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 OR14A16Q8NHC5 309 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 STT3BQ8TCJ2 826 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 FCGR1BQ92637 280 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 OSTF1Q92882 214 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 FGF11Q92914 225 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC35B4Q969S0 331 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 YIPF6Q96EC8 236 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 TSSK6Q9BXA6 273 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 DPH1Q9BZG8 443 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 TRIM2Q9C040 744 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 TGIF2Q9GZN2 237 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 SMOC1Q9H4F8 434 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 GPN2Q9H9Y4 310 aaPredicted RBP18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 ATP13A2Q9NQ11 1180 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 ENPP5Q9UJA9 477 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 A0A1B0GWA3 101 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 CSTAP01040 98 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 SYPP08247 313 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 IFI30P13284 250 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 MAKP20794 623 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 PRKCDQ05655 676 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 NKAIN1Q4KMZ8 207 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 KLHL26Q53HC5 615 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 PHF19Q5T6S3 580 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 FAAH2Q6GMR7 532 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 ZNF620Q6ZNG0 422 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 LSMEM1Q8N8F7 131 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 TBC1D23Q9NUY8 699 aa18.28■□□□□ 0.52
PDLIM5-205ENST00000380180 C2orf92A0A1B0GVN3 265 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 FRG2CA6NGY1 282 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 KPNA4O00629 521 aaPredicted RBP18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 CHP2O43745 196 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 IL33O95760 270 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 ZGLP1P0C6A0 271 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 PIPP12273 146 aaPredicted RBP18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 IRF3Q14653 427 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 PLAG1Q6DJT9 500 aa18.27■□□□□ 0.52
PDLIM5-205ENST00000380180 SLC30A6Q6NXT4 461 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms