RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 OR7G1Q8NGA0 311 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 OR52I1Q8NGK6 324 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 GRHL3Q8TE85 626 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 PRRG3Q9BZD7 231 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 ATP13A2Q9NQ11 1180 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 IL20RAQ9UHF4 553 aa18.08■□□□□ 0.48
HDAC1-201ENST00000373548 A0A1B0GWA3 101 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 UNC119BA6NIH7 251 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 SURF4O15260 269 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 PRODHO43272 600 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 IFI30P13284 250 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 FUT1P19526 365 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 BMXP51813 675 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 EFNA3P52797 238 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 GAS1P54826 345 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 RHAGQ02094 409 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 MINDY4Q4G0A6 757 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 RNLSQ5VYX0 342 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 QSOX2Q6ZRP7 698 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 WDR5BQ86VZ2 330 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF501Q96CX3 271 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 SAMD8Q96LT4 415 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF768Q9H5H4 540 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 FSCN3Q9NQT6 498 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 FGF21Q9NSA1 209 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 SIDT1Q9NXL6 827 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 SERTAD3Q9UJW9 196 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 PILRBQ9UKJ0 227 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 A8MUA0 341 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 KDM4EB2RXH2 506 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 KPNA4O00629 521 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 DSCR3O14972 297 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 PRKNO60260 465 aaPredicted RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 FBLP22087 321 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 CLK1P49759 484 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 PSMD4P55036 377 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 SLC37A1P57057 533 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 FXYD6P3P58550 94 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 TMPRSS9Q7Z410 1059 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 TMEM151BQ8IW70 566 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 ANKK1Q8NFD2 765 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 OR4C3Q8NH37 302 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 LMF1Q96S06 567 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 HHATLQ9HCP6 504 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF304Q9HCX3 659 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 DIMT1Q9UNQ2 313 aaKnown RBP18.07■□□□□ 0.48
HDAC1-201ENST00000373548 ERGIC3Q9Y282 383 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 PMF1-BGLAPU3KQ54 211 aa18.07■□□□□ 0.48
HDAC1-201ENST00000373548 A0A1B0GTQ1 180 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 CHP2O43745 196 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 CSO75390 466 aaKnown RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 ZGLP1P0C6A0 271 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 TSTQ16762 297 aaKnown RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 BRIX1Q8TDN6 353 aaKnown RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 CLIP3Q96DZ5 547 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 ZHX1-C8orf76Q96EF9 292 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 TRIM2Q9C040 744 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 OR51E2Q9H255 320 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 OR52D1Q9H346 318 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 MEPEQ9NQ76 525 aaPredicted RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 PRMT8Q9NR22 394 aaPredicted RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 MRPS18AQ9NVS2 196 aaKnown RBP18.06■□□□□ 0.48
HDAC1-201ENST00000373548 MED31Q9Y3C7 131 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 PCDHGA3Q9Y5H0 932 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 MUC3AQ02505 3323 aa18.06■□□□□ 0.48
HDAC1-201ENST00000373548 LY6G6EA0A0G2JKS1 128 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 NADKO95544 446 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 RPLP0P05388 317 aaKnown RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 DGUOKQ16854 277 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 NDUFAF6Q330K2 333 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF829Q3KNS6 432 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 VWA2Q5GFL6 755 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 C1orf189Q5VU69 101 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 C19orf48Q6RUI8 117 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 PAQR6Q6TCH4 344 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 HSDL2Q6YN16 418 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 TMPRSS11FQ6ZWK6 438 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 HEATR5AQ86XA9 2040 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 CYP4Z2PQ8N1L4 340 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 NANOGP1Q8N7R0 232 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 LSMEM1Q8N8F7 131 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 OR2T33Q8NG76 320 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 SLC35B4Q969S0 331 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 BPIFA2Q96DR5 249 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 OPALINQ96PE5 141 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 UBQLN3Q9H347 655 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 ZBTB20Q9HC78 741 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 ATXN7L1Q9ULK2 861 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 U3KQA8 63 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 COL5A1P20908 1838 aaPredicted RBP18.05■□□□□ 0.48
HDAC1-201ENST00000373548 A0A1B0GX78 115 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 RFPL3O75679 317 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 RAB36O95755 333 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 LIMK1P53667 647 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 SSX1Q16384 188 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 ZSWIM7Q19AV6 140 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 GUSBP11Q6P575 273 aa18.05■□□□□ 0.48
HDAC1-201ENST00000373548 ZNF574Q6ZN55 896 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms