RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CYP4Z2PQ8N1L4 340 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 Q8N9G6 341 aaPredicted RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 SLC38A2Q96QD8 506 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 MND1Q9BWT6 205 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 KLHL25Q9H0H3 589 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 QRSL1Q9H0R6 528 aaKnown RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 AKIP1Q9NQ31 210 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 MRPS18AQ9NVS2 196 aaKnown RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 MAT2BQ9NZL9 334 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 CCDC59Q9P031 241 aaKnown RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 ERGIC3Q9Y282 383 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 MRPS33Q9Y291 106 aaKnown RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 MRPS2Q9Y399 296 aaKnown RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 PCDHGA3Q9Y5H0 932 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 M0R129 80 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 CCRL2O00421 344 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 KIAA0513O60268 411 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 DBTP11182 482 aaKnown RBP13.04□□□□□ -0.32
LDB3-204ENST00000372066 NID1P14543 1247 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 TNNI3P19429 210 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 OPRL1P41146 370 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 MAP3K8P41279 467 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 RGS6P49758 472 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 MLLT10P55197 1068 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 NCS1P62166 190 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 EEF1A1P68104 462 aaKnown RBP13.04□□□□□ -0.32
LDB3-204ENST00000372066 EIF3IQ13347 325 aaKnown RBP13.04□□□□□ -0.32
LDB3-204ENST00000372066 C1DQ13901 141 aaKnown RBP13.04□□□□□ -0.32
LDB3-204ENST00000372066 NR1D2Q14995 579 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 SYT16Q17RD7 645 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 PRTGQ2VWP7 1150 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 KLHL22Q53GT1 634 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 ZNF836Q6ZNA1 936 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 ARHGEF39Q8N4T4 335 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 SLC15A4Q8N697 577 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 AMER2Q8N7J2 671 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 TCEANCQ8N8B7 351 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 COX18Q8N8Q8 333 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 OR6C4Q8NGE1 309 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 OSTF1Q92882 214 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 TCTN2Q96GX1 697 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 MGLLQ99685 303 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 TSSK6Q9BXA6 273 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 DCSTAMPQ9H295 470 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 MMP27Q9H306 513 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 LRRN3Q9H3W5 708 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 ANKRA2Q9H9E1 313 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 ADAP2Q9NPF8 381 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 MED17Q9NVC6 651 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 C14orf105Q9NVL8 296 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 CHST2Q9Y4C5 530 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 SCN2AQ99250 2005 aa13.04□□□□□ -0.32
LDB3-204ENST00000372066 SETXQ7Z333 2677 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 CFAP46Q8IYW2 2715 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 A0A1W2PQM1 296 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TTC36A6NLP5 189 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 B4DGG1 531 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 D6RAR5 112 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 AGRPO00253 132 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 EFSO43281 561 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 FCMRO60667 390 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 UBXN7O94888 489 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 RNH1P13489 461 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 ST6GAL1P15907 406 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 GADD45AP24522 165 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 SOX18P35713 384 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 CAPZBP47756 277 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 OMPP47874 163 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 AVPR1BP47901 424 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 SNRPNP63162 240 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 POU6F2P78424 691 aaPredicted RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 EFNB1P98172 346 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 MAP4K2Q12851 820 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TRMT12Q53H54 448 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 GARNL3Q5VVW2 1013 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 Q6ZNX1 250 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 MBOAT2Q6ZWT7 520 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 PRSS41Q7RTY9 318 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 RNF113BQ8IZP6 322 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 PROKR2Q8NFJ6 384 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 OR6Q1Q8NGQ2 317 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TMEM163Q8TC26 289 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 SLIRPQ9GZT3 109 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 CHRNA10Q9GZZ6 450 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TVP23BQ9NYZ1 205 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 DNAJC27Q9NZQ0 273 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 TESQ9UGI8 421 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 ATXN7L1Q9ULK2 861 aaPredicted RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 GPR55Q9Y2T6 319 aaPredicted RBP13.03□□□□□ -0.32
LDB3-204ENST00000372066 TRAPPC13A5PLN9 417 aa13.03□□□□□ -0.32
LDB3-204ENST00000372066 PYCARD-AS1I3L0S3 204 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms