RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ZNF438Q7Z4V0 828 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 TMEM99Q8N816 258 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 OR1E3Q8WZA6 343 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 KISS1RQ969F8 398 aaPredicted RBP13.27□□□□□ -0.29
CD48-201ENST00000368045 CREB3L1Q96BA8 519 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 TIMP4Q99727 224 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 ZNF559Q9BR84 538 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 PLA2G2FQ9BZM2 168 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.27□□□□□ -0.29
CD48-201ENST00000368045 ISG20L2Q9H9L3 353 aaKnown RBP13.27□□□□□ -0.29
CD48-201ENST00000368045 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 MALT1Q9UDY8 824 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 SLC35A3Q9Y2D2 325 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 ALG5Q9Y673 324 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 MYO7AQ13402 2215 aa13.27□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3DA0A087WVF3 549 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3IA0A087WXS9 549 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 FAM183AA6NL82 134 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3LB9A6J9 549 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 PLPP2O43688 288 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 GUSBP08236 651 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3HP0C7X1 549 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 BMP8BP34820 402 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 RFX3P48380 749 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 BTG1P62324 171 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 POU4F2Q12837 409 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 MAPK14Q16539 360 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 AMZ1Q400G9 498 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3CQ6IPX1 549 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 FBXO46Q6PJ61 603 aaPredicted RBP13.26□□□□□ -0.29
CD48-201ENST00000368045 FIGLAQ6QHK4 219 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 WDR88Q6ZMY6 472 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 BMP8AQ7Z5Y6 402 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TBC1D3Q8IZP1 549 aaPredicted RBP13.26□□□□□ -0.29
CD48-201ENST00000368045 COX18Q8N8Q8 333 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 OR5W2Q8NH69 310 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 ZCCHC10Q8TBK6 192 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 TRIM63Q969Q1 353 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 GABRG3Q99928 467 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 GON7Q9BXV9 100 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 MKRN2Q9H000 416 aaKnown RBP13.26□□□□□ -0.29
CD48-201ENST00000368045 FOLH1BQ9HBA9 442 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 ING3Q9NXR8 418 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 CLDND1Q9NY35 253 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 HAO2Q9NYQ3 351 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 ZNF624Q9P2J8 865 aaPredicted RBP13.26□□□□□ -0.29
CD48-201ENST00000368045 EXTL2Q9UBQ6 330 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 IL20RAQ9UHF4 553 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 PILRAQ9UKJ1 303 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 SCML1Q9UN30 329 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 MED31Q9Y3C7 131 aa13.26□□□□□ -0.29
CD48-201ENST00000368045 MYO10Q9HD67 2058 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CENPVL1A0A0U1RR11 272 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 RIIAD1A6NNX1 92 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SLC31A1O15431 190 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 P2RX6O15547 441 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 APBB3O95704 486 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 EML2O95834 649 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 PRG2P13727 222 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 MYOGP15173 224 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 UGT2B7P16662 529 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ELK1P19419 428 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 RBMS1P29558 406 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 NTSR1P30989 418 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 MAT2AP31153 395 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 MAP3K8P41279 467 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ATP12AP54707 1039 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ACTC1P68032 377 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ACTA1P68133 377 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CD83Q01151 205 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 FOXK2Q01167 660 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 GAS6Q14393 721 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 TRMT12Q53H54 448 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 PRRT3Q5FWE3 981 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 MANEAQ5SRI9 462 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 BICRALQ6AI39 1079 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SDE2Q6IQ49 451 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 PLCZ1Q86YW0 608 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 TEX19Q8NA77 164 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SLC37A3Q8NCC5 494 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 NLGN4YQ8NFZ3 816 aaPredicted RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 PFN4Q8NHR9 129 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ZFPM2Q8WW38 1151 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ELSPBP1Q96BH3 223 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 BPIFA2Q96DR5 249 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 WDR92Q96MX6 357 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 FYTTD1Q96QD9 318 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 TMEM27Q9HBJ8 222 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 ADAP2Q9NPF8 381 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 RPRD1BQ9NQG5 326 aaKnown RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 SIGLEC7Q9Y286 467 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 SIRT4Q9Y6E7 314 aaPredicted RBP13.25□□□□□ -0.29
CD48-201ENST00000368045 K7EQS6 105 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 TNFRSF10CO14798 259 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 CTSVO60911 334 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 GPR75O95800 540 aa13.25□□□□□ -0.29
CD48-201ENST00000368045 C1QBP02746 253 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms