RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TM9SF4Q92544 642 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 OTULINQ96BN8 352 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 MOAP1Q96BY2 351 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 TM4SF18Q96CE8 201 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 C1GALT1C1Q96EU7 318 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 RNFT2Q96EX2 444 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 LRR1Q96L50 414 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 GPR137Q96N19 417 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 ZNF578Q96N58 590 aaPredicted RBP10.74□□□□□ -0.69
USF1-201ENST00000368019 RIOK2Q9BVS4 552 aaKnown RBP10.74□□□□□ -0.69
USF1-201ENST00000368019 FNDC11Q9BVV2 318 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 PINK1Q9BXM7 581 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 MS4A8Q9BY19 250 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 OR51B5Q9H339 312 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 EMC7Q9NPA0 242 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 ATP13A2Q9NQ11 1180 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 WASH6PQ9NQA3 447 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 RHCGQ9UBD6 479 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 IL36AQ9UHA7 158 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 BOLA1Q9Y3E2 137 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 CDH10Q9Y6N8 788 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 PIEZO2Q9H5I5 2752 aa10.74□□□□□ -0.69
USF1-201ENST00000368019 SPTY2D1-AS1A0A0U1RR47 76 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 TMEM202A6NGA9 273 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 OR2AG2A6NM03 316 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 INMT-MINDY4F8WBC2 141 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 K7ESM1 405 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 WWP2O00308 870 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 CASKO14936 926 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SOX14O95416 240 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 LIMS3P0CW19 117 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 LIMS4P0CW20 117 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MYF5P13349 255 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 DRD2P14416 443 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SLC1A3P43003 542 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MTNR1AP48039 350 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 LSSP48449 732 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MTNR1BP49286 362 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 INPP1P49441 399 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MANFP55145 182 aaKnown RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 RPS21P63220 83 aaKnown RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 GPLD1P80108 840 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 FABP5Q01469 135 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MXD1Q05195 221 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SNAPC1Q16533 368 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 FLYWCH1Q4VC44 716 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 ZNF542PQ5EBM4 170 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 ZNF648Q5T619 568 aaPredicted RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 PRAMEF13Q5VWM6 474 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 KHDRBS2Q5VWX1 349 aaKnown RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 KIAA1161Q6NSJ0 714 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 BHLHB9Q6PI77 547 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 TMEM220Q6QAJ8 160 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 PAQR6Q6TCH4 344 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 Q6ZVL8 140 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 LRRC28Q86X40 367 aaPredicted RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 NUDT13Q86X67 352 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 ZNF843Q8N446 348 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 KLHL36Q8N4N3 616 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SUN3Q8TAQ9 357 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SNAPC3Q92966 411 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SCAMP4Q969E2 229 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SLC35G5Q96KT7 338 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 DCLRE1CQ96SD1 692 aaKnown RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 C7orf50Q9BRJ6 194 aaKnown RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 SLC17A9Q9BYT1 436 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 PCBD2Q9H0N5 130 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 KCNN2Q9H2S1 579 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 RANBP3Q9H6Z4 567 aaPredicted RBP10.73□□□□□ -0.69
USF1-201ENST00000368019 ASCL3Q9NQ33 180 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 MAN2C1Q9NTJ4 1040 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 EMC3Q9P0I2 261 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 CD84Q9UIB8 345 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 NUP50Q9UKX7 468 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 CSNK1G3Q9Y6M4 447 aa10.73□□□□□ -0.69
USF1-201ENST00000368019 A0A0G2JMP0 313 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 A0A1W2PNU3 283 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ANKDD1BA6NHY2 528 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 HNRNPCL2B2RXH8 293 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 B8ZZF3 427 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 GABRPO00591 440 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 NOS1APO75052 506 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 CPNE3O75131 537 aaKnown RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 MTX2O75431 263 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 PAK4O96013 591 aaPredicted RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 DHFRP00374 187 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 CSF2P04141 144 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ALPPL2P10696 532 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 ADRB3P13945 408 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 NME1P15531 152 aaKnown RBP10.72□□□□□ -0.69
USF1-201ENST00000368019 TIMP2P16035 220 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 TNNI3P19429 210 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 KELP23276 732 aa10.72□□□□□ -0.69
USF1-201ENST00000368019 APEX1P27695 318 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms