RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ING5Q8WYH8 240 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SLC41A3Q96GZ6 507 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 COQ10AQ96MF6 247 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 KCNN2Q9H2S1 579 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SYNPO2LQ9H987 977 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 EMC7Q9NPA0 242 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 DIABLOQ9NR28 239 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 HCN3Q9P1Z3 774 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 UBQLN2Q9UHD9 624 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SZT2Q5T011 3432 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 RANBP2P49792 3224 aaKnown RBP9.44□□□□□ -0.9
PTPRA-203ENST00000356147 MTCL1Q9Y4B5 1905 aaKnown RBP9.44□□□□□ -0.9
PTPRA-203ENST00000356147 A0A0G2JK05 382 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 M0R233 179 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 EFEMP2O95967 443 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 IGHA1P01876 353 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 NPR2P20594 1047 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 NTSP30990 170 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 IFNGR2P38484 337 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 RIN1Q13671 783 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 GPR68Q15743 365 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 TP53I3Q53FA7 332 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ACSM3Q53FZ2 586 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 THSD4Q6ZMP0 1018 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 GET4Q7L5D6 327 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-203ENST00000356147 LINC01555Q8NAE3 123 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OR52N1Q8NH53 320 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OR51Q1Q8NH59 317 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OSTF1Q92882 214 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 NXPE2Q96DL1 559 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 NUS1Q96E22 293 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 DERL3Q96Q80 235 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OR52A5Q9H2C5 316 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 OR52D1Q9H346 318 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 ASB6Q9NWX5 421 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SAGE1Q9NXZ1 904 aa9.44□□□□□ -0.9
PTPRA-203ENST00000356147 SNRNP200O75643 2136 aaKnown RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 TRAV27A0A087WT01 109 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 A0A1W2PPL8 197 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ANKRD61A6NGH8 418 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 NDUFV2P19404 249 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 MTNR1BP49286 362 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 BLVRAP53004 296 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 RAB14P61106 215 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ID2Q02363 134 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 HSF2Q03933 536 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 TCEAL5Q5H9L2 206 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 CDC73Q6P1J9 531 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 LCTLQ6UWM7 567 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 WDR88Q6ZMY6 472 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 NLRC3Q7RTR2 1065 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 UXS1Q8NBZ7 420 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 NUP43Q8NFH3 380 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 GHSRQ92847 366 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 CXorf58Q96LI9 332 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 TRAF4Q9BUZ4 470 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 SPATA5L1Q9BVQ7 753 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ERVMER34-1Q9H9K5 563 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 IL20Q9NYY1 176 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 PRKAG2Q9UGJ0 569 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ZMIZ1Q9ULJ6 1067 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 RCE1Q9Y256 329 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 COL4A3Q01955 1670 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 TCRBV16S1A1N1A0A5B0 115 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 CDHR4A6H8M9 788 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 G3V3Q6 166 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 H3BUI4 141 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 GNB5O14775 395 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 PCCBP05166 539 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 MAKP20794 623 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 TEAD1P28347 426 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 RBMS1P29558 406 aaKnown RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 FXYD6P3P58550 94 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 SLC25A25Q6KCM7 469 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 LINGO2Q7L985 606 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 OR13C2Q8NGS9 318 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ZNF671Q8TAW3 534 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ACOT11Q8WXI4 607 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 PEX11GQ96HA9 241 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 ZSWIM3Q96MP5 696 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 PINK1Q9BXM7 581 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 NANSQ9NR45 359 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 SPHK2Q9NRA0 654 aa9.43□□□□□ -0.9
PTPRA-203ENST00000356147 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 EXOGQ9Y2C4 368 aaKnown RBP9.43□□□□□ -0.9
PTPRA-203ENST00000356147 IGKV1-8A0A0C4DH67 115 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 PRR23AA6NEV1 266 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TRABD2BA6NFA1 517 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 TRIM77I1YAP6 450 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 MAN2B1O00754 1011 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 AIFM1O95831 613 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 IFNA7P01567 189 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 IL9P15248 144 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 FRKP42685 505 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 KIAA1024LP59773 190 aa9.42□□□□□ -0.9
PTPRA-203ENST00000356147 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
PTPRA-203ENST00000356147 HYAL4Q2M3T9 481 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms