RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CHMP24386 653 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 STARP49675 285 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 P2RX1P51575 399 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 FADDQ13158 208 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 FGFBP1Q14512 234 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GLYR1Q49A26 553 aaPredicted RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 C1orf185Q5T7R7 199 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 ENPP6Q6UWR7 440 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 SPATA21Q7Z572 469 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 DHDDSQ86SQ9 333 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 PM20D2Q8IYS1 436 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 C10orf111Q8N326 155 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 DPP10Q8N608 796 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 PHF10Q8WUB8 498 aaKnown RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 SLC38A5Q8WUX1 472 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 IKZF5Q9H5V7 419 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 THUMPD1Q9NXG2 353 aaKnown RBP13.81□□□□□ -0.2
UBE3B-201ENST00000340074 ICAM5Q9UMF0 924 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 GMEB1Q9Y692 573 aa13.81□□□□□ -0.2
UBE3B-201ENST00000340074 A0A087WZY1 265 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 AHRRA9YTQ3 701 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 FBP2O00757 339 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 NUDT14O95848 222 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 CPN1P15169 458 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 DRD4P21917 467 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 PPIBP23284 216 aaKnown RBP13.8□□□□□ -0.2
UBE3B-201ENST00000340074 ADH7P40394 386 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 LHX2P50458 406 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF41P51814 821 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-201ENST00000340074 SRYQ05066 204 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 PMPCAQ10713 525 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 NFYCQ13952 458 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 PLPPR5Q32ZL2 321 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 TMEM211Q6ICI0 200 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 B3GNT6Q6ZMB0 384 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 CPLX4Q7Z7G2 160 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 TMCO5AQ8N6Q1 288 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 ITLN2Q8WWU7 325 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-201ENST00000340074 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 MAL2Q969L2 176 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 PSMG3-AS1Q96PY0 264 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 NPAS1Q99742 590 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 PIGQQ9BRB3 760 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 NSRP1Q9H0G5 558 aaKnown RBP13.8□□□□□ -0.2
UBE3B-201ENST00000340074 MTHFD2LQ9H903 347 aaPredicted RBP13.8□□□□□ -0.2
UBE3B-201ENST00000340074 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 ARMCX1Q9P291 453 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF337Q9Y3M9 751 aa13.8□□□□□ -0.2
UBE3B-201ENST00000340074 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CLDN24A6NM45 220 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 EVPLLA8MZ36 301 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 KDM4EB2RXH2 506 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 H3BML4 177 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CYP7B1O75881 506 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CSTAP01040 98 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 HOXD4P09016 255 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 UBTFL6P0CB48 400 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 GLI4P10075 376 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 BMP2P12643 396 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF708P17019 499 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ADSLP30566 484 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CCR4P51679 360 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CRISP3P54108 245 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 SUMO3P55854 103 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CLDN18P56856 261 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 NUP107P57740 925 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 SKP2Q13309 424 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 TMEM44Q2T9K0 475 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 RUNDC3AQ59EK9 446 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 RPS26P11Q5JNZ5 115 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 RPTNQ6XPR3 784 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 EIF3MQ7L2H7 374 aaKnown RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 MRGPRGQ86SM5 289 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ZBTB8AQ96BR9 441 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ARSGQ96EG1 525 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 TMEM19Q96HH6 336 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ANKRD27Q96NW4 1050 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CGREF1Q99674 301 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 TREX2Q9BQ50 279 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CPPED1Q9BRF8 314 aaPredicted RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 TTYH2Q9BSA4 534 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 TRIM8Q9BZR9 551 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CALML5Q9NZT1 146 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CORO2BQ9UQ03 480 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 CAPN7Q9Y6W3 813 aa13.79□□□□□ -0.2
UBE3B-201ENST00000340074 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
UBE3B-201ENST00000340074 HCFC1P51610 2035 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 LOC100653049A0A140TA62 436 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 A1L4Q6 167 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 TMEM247A6NEH6 219 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 FAM47E-STBD1D6RA91 191 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 H0Y3Z8 333 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 EIF4E2O60573 245 aaKnown RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 CCDC22O60826 627 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 BCAS1O75363 584 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-201ENST00000340074 KRT34O76011 436 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 LINGO3P0C6S8 592 aa13.78□□□□□ -0.2
UBE3B-201ENST00000340074 ZNF17P17021 662 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms