RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 OOSP2Q86WS3 158 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 ASB15Q8WXK1 588 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 ORAI1Q96D31 301 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 KLHDC7BQ96G42 594 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SLC38A2Q96QD8 506 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SARGQ9BW04 601 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 GSDMCQ9BYG8 508 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 MTHFD2LQ9H903 347 aaPredicted RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 CHCHD3Q9NX63 227 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 DHCR7Q9UBM7 475 aaKnown RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 SSR3Q9UNL2 185 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 LIPT1Q9Y234 373 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
SNCA-201ENST00000336904 SIRT4Q9Y6E7 314 aaPredicted RBP8.2□□□□□ -1.1
SNCA-201ENST00000336904 E9PI62 339 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 PRAMEF26H0Y7S4 382 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 PRODHO43272 600 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SLC1A3P43003 542 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 WNT4P56705 351 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TUBA1BP68363 451 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 MRPS21P82921 87 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 PSG6Q00889 435 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 MGAT2Q10469 447 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NCF4Q15080 339 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 RNASE12Q5GAN4 147 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 FHL5Q5TD97 284 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 KIAA0895LQ68EN5 471 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 FAAH2Q6GMR7 532 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TUBA1AQ71U36 451 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 GDPD3Q7L5L3 318 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CXXC5Q7LFL8 322 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 MCATQ8IVS2 390 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 ZNF619Q8N2I2 560 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ZNF655Q8N720 491 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 POGLUT1Q8NBL1 392 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 GPBAR1Q8TDU6 330 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TNFRSF13CQ96RJ3 184 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SPRTNQ9H040 489 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 MMP28Q9H239 520 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 LMAN1LQ9HAT1 526 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ANKHQ9HCJ1 492 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 INIPQ9NRY2 104 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SIDT1Q9NXL6 827 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 PCOLCE2Q9UKZ9 415 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 STUB1Q9UNE7 303 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 C19orf53Q9UNZ5 99 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 ADAM18Q9Y3Q7 739 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 KLK4Q9Y5K2 254 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 IGHV5-51A0A0C4DH38 117 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 A0A1W2PQL4 384 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 URADA6NGE7 173 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 DUXAA6NLW8 204 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 C12orf71A8MTZ7 269 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ATP6V1G1O75348 118 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SLITRK5O94991 958 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 UGT2B10P36537 528 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ACVR1BP36896 505 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NAA10P41227 235 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 CSNK1EP49674 416 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 LIMK1P53667 647 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 POU6F2P78424 691 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 RHAGQ02094 409 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SFSWAPQ12872 951 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 CEBPEQ15744 281 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 OCLNQ16625 522 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 MINDY4Q4G0A6 757 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TMEM201Q5SNT2 666 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NXNL2Q5VZ03 156 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 FAM131AQ6UXB0 335 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CCBE1Q6UXH8 406 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 MBOAT2Q6ZWT7 520 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 SDR9C7Q8NEX9 313 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TSTD1Q8NFU3 115 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 OR4C3Q8NH37 302 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 C9orf43Q8TAL5 461 aaPredicted RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 FAM174AQ8TBP5 190 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 TMEM239Q8WW34 195 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 FGF11Q92914 225 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 BEX2Q9BXY8 128 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ZNF350Q9GZX5 532 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 PIGUQ9H490 435 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NDUFB11Q9NX14 153 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CBLCQ9ULV8 474 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 DIMT1Q9UNQ2 313 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 B3GNT3Q9Y2A9 372 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 A0A087WV48 116 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CDHR4A6H8M9 788 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CASKO14936 926 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 IFNA8P32881 189 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 RABIFP47224 123 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 CRYZQ08257 329 aaKnown RBP8.19□□□□□ -1.1
SNCA-201ENST00000336904 COX10Q12887 443 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 ZNF79Q15937 498 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NPSR1Q6W5P4 371 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 RASSF6Q6ZTQ3 369 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 NRARPQ7Z6K4 114 aa8.19□□□□□ -1.1
SNCA-201ENST00000336904 C19orf47Q8N9M1 422 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms