RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 OSTF1Q92882 214 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 YIPF6Q96EC8 236 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 DCUN1D5Q9BTE7 237 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 VN1R1Q9GZP7 353 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 SLC22A11Q9NSA0 550 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 TBC1D23Q9NUY8 699 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 FLRT3Q9NZU0 649 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 CTSFQ9UBX1 484 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 MKL2Q9ULH7 1088 aa13.78□□□□□ -0.2
TPM3-205ENST00000328159 A0A0B4J2E0 115 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 A0A1B0GWA3 101 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 A0A1B0GX12 115 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 SERINC4A6NH21 518 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 AGRPO00253 132 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 PRKNO60260 465 aaPredicted RBP13.77□□□□□ -0.21
TPM3-205ENST00000328159 ADAM11O75078 769 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 DAB2P98082 770 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 EFNB1P98172 346 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 PRKCDQ05655 676 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 SNAPC1Q16533 368 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 MEDAGQ5VYS4 303 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 ZNF620Q6ZNG0 422 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 ZNF550Q7Z398 422 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 PLPP5Q8NEB5 264 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 OR4C3Q8NH37 302 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 OR14A16Q8NHC5 309 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 C9orf43Q8TAL5 461 aaPredicted RBP13.77□□□□□ -0.21
TPM3-205ENST00000328159 GRHL3Q8TE85 626 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 DAZLQ92904 295 aaKnown RBP13.77□□□□□ -0.21
TPM3-205ENST00000328159 FGF11Q92914 225 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 EFHD2Q96C19 240 aaPredicted RBP13.77□□□□□ -0.21
TPM3-205ENST00000328159 ART5Q96L15 291 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 LMF1Q96S06 567 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 NUDT9Q9BW91 350 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 TSSK6Q9BXA6 273 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 NXF5Q9H1B4 397 aaKnown RBP13.77□□□□□ -0.21
TPM3-205ENST00000328159 IL20Q9NYY1 176 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 RARRES3Q9UL19 164 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 CDH10Q9Y6N8 788 aa13.77□□□□□ -0.21
TPM3-205ENST00000328159 ASCC3Q8N3C0 2202 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 FRG2CA6NGY1 282 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 UNC119BA6NIH7 251 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 TMX2-CTNND1H3BSU7 103 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CHP2O43745 196 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 IL33O95760 270 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CKMT1AP12532 417 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 IFI30P13284 250 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 NFATC3Q12968 1075 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CLEC12AQ5QGZ9 265 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 PLAG1Q6DJT9 500 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SLC23A3Q6PIS1 610 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 BCDIN3DQ7Z5W3 292 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 CLDN22Q8N7P3 220 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 PFN4Q8NHR9 129 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 TMEM163Q8TC26 289 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 LCORQ96JN0 433 aaPredicted RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 HS6ST2Q96MM7 605 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SLC38A2Q96QD8 506 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CDCA4Q9BXL8 241 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 PRRG3Q9BZD7 231 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 TGIF2Q9GZN2 237 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 HOXD1Q9GZZ0 328 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 RPL36Q9Y3U8 105 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SCRG1O75711 98 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 GABARAPO95166 117 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 TIAF1O95411 115 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CSTAP01040 98 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SYPP08247 313 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 MAKP20794 623 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 OCA2Q04671 838 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 ZNF91Q05481 1191 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SYT14P1Q58G82 188 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 LSMEM1Q8N8F7 131 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 OR4Q3Q8NH05 313 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 WDR36Q8NI36 951 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 STT3BQ8TCJ2 826 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 OIT3Q8WWZ8 545 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 ADIPOR1Q96A54 375 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 CRELD1Q96HD1 420 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 BCL7BQ9BQE9 202 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 GTPBP2Q9BX10 602 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 DPH1Q9BZG8 443 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SLC24A3Q9HC58 644 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 SIDT1Q9NXL6 827 aaKnown RBP13.76□□□□□ -0.21
TPM3-205ENST00000328159 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 MED31Q9Y3C7 131 aa13.76□□□□□ -0.21
TPM3-205ENST00000328159 IGLV3-12A0A075B6K2 115 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 C2orf92A0A1B0GVN3 265 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 SYNDIG1LA6NDD5 238 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 EFCAB7A8K855 629 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 M0R082 166 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 KPNA4O00629 521 aaPredicted RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 CNOT3O75175 753 aaKnown RBP13.75□□□□□ -0.21
TPM3-205ENST00000328159 PTHP01270 115 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 ADRA2AP08913 450 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 ADORA3P0DMS8 318 aa13.75□□□□□ -0.21
TPM3-205ENST00000328159 DBTP11182 482 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms