RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 MELKQ14680 651 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 INPP5JQ15735 1006 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 C22orf42Q6IC83 251 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SLC25A24Q6NUK1 477 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 DEGS2Q6QHC5 323 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MOB3CQ70IA8 216 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PRICKLE2Q7Z3G6 844 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MRGPREQ86SM8 312 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 FAM46DQ8NEK8 389 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SLC24A4Q8NFF2 622 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR10A6Q8NH74 314 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CD99L2Q8TCZ2 262 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HIST1H2BAQ96A08 127 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 KCNC2Q96PR1 638 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 FAM193BQ96PV7 902 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MESP1Q9BRJ9 268 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 RSRP1Q9BUV0 290 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ADGRE3Q9BY15 652 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 C2orf42Q9NWW7 574 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 NTMQ9P121 344 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ACSL6Q9UKU0 697 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 A0A0A6YYC8 382 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 A0A1W2PPC1 479 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 A0A1W2PRB8 838 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TSPAN11A1L157 253 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 B4E171 279 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 BLOC1S5-TXNDC5H3BN57 136 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 I3L1I5 382 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ITGB1BP1O14713 200 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IMPA2O14732 288 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HCRTO43612 131 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IGF2P01344 180 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HPXP02790 462 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 C8GP07360 202 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 RHOP08100 348 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GIPP09681 153 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 NPSP0C0P6 89 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TYRP14679 529 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TBXA2RP21731 343 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CTSOP43234 321 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IDH2P48735 452 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 STK19P49842 368 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ACSM1Q08AH1 577 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MAP2K5Q13163 448 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HTR4Q13639 388 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GFOD2Q3B7J2 385 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 FAM46CQ5VWP2 391 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PLAG1Q6DJT9 500 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CFAP206Q8IYR0 622 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CDK20Q8IZL9 346 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF687Q8N1G0 1237 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GPR137CQ8N3F9 429 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MDGA1Q8NFP4 955 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 STOML3Q8TAV4 291 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 C14orf79Q96F83 325 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF354BQ96LW1 612 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 KCTD7Q96MP8 289 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZIC5Q96T25 663 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OSMRQ99650 979 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MAPKAP1Q9BPZ7 522 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 THAP7Q9BT49 309 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CHST5Q9GZS9 411 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TLNRD1Q9H1K6 362 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CACYBPQ9HB71 228 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SMCO4Q9NRQ5 59 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ACSS1Q9NUB1 689 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MED17Q9NVC6 651 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF226Q9NYT6 803 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IL17CQ9P0M4 197 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PIPOXQ9P0Z9 390 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 LSM2Q9Y333 95 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR10H1Q9Y4A9 318 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TRIP12Q14669 1992 aaPredicted RBP6.21□□□□□ -1.41
ZNF540-201ENST00000316433 C1orf226A1L170 272 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 HMSDA8MTL9 139 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PRR23D1E9PI22 279 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 HCRTR2O43614 444 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ADH1AP07327 375 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 LINC00032P0C843 101 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PRR23D2P0DMB1 279 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 NME1P15531 152 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PRPS1L1P21108 318 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 DGKAP23743 735 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 AKAP5P24588 427 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RPL3P39023 403 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 AKR1C2P52895 323 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 CD81P60033 236 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 RAP2BP61225 183 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 FOXK1P85037 733 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 AKR1C1Q04828 323 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 SLC10A7Q0GE19 358 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 GTF2H2Q13888 395 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 PDE7AQ13946 482 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 HNF4GQ14541 408 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 ARHGAP19Q14CB8 494 aa6.21□□□□□ -1.42
ZNF540-201ENST00000316433 TSNQ15631 228 aaKnown RBP6.21□□□□□ -1.42
ZNF540-201ENST00000316433 HACD4Q5VWC8 232 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms