RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PATE1Q8WXA2 126 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 UPRTQ96BW1 309 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 SARGQ9BW04 601 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 ANKRD19PQ9H560 264 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 KIR3DX1Q9H7L2 352 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 CACYBPQ9HB71 228 aaKnown RBP23.54■■□□□ 1.36
HOXB3-201ENST00000311626 STARD5Q9NSY2 213 aa23.54■■□□□ 1.36
HOXB3-201ENST00000311626 USP36Q9P275 1121 aaKnown RBP23.54■■□□□ 1.36
HOXB3-201ENST00000311626 K7EQS6 105 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 MAGEB4O15481 346 aaPredicted RBP23.53■■□□□ 1.36
HOXB3-201ENST00000311626 LYRM1O43325 122 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 LANCL1O43813 399 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 PAICSP22234 425 aaKnown RBP23.53■■□□□ 1.36
HOXB3-201ENST00000311626 E2F1Q01094 437 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 SLC3A1Q07837 685 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 ARHGAP11BQ3KRB8 267 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 ZAR1Q86SH2 424 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 ZNF614Q8N883 585 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 SLC35G6P0C7Q6 338 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 NDUFA5Q16718 116 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 NIPAL3Q6P499 406 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 OR2L13Q8N349 312 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 YIPF7Q8N8F6 280 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 ZNF784Q8NCA9 323 aaPredicted RBP23.53■■□□□ 1.36
HOXB3-201ENST00000311626 LILRB4Q8NHJ6 448 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 IFT27Q9BW83 186 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 EXTL2Q9UBQ6 330 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 CLEC4AQ9UMR7 237 aa23.53■■□□□ 1.36
HOXB3-201ENST00000311626 GXYLT2A0PJZ3 443 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 CHST10O43529 356 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 HMGN1P05114 100 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 COL9A1P20849 921 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 NT5EP21589 574 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 INPP1P49441 399 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 ACBD7Q8N6N7 88 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 OR52N1Q8NH53 320 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 PTP4A1Q93096 173 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 CLDND1Q9NY35 253 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 DAPL1A0PJW8 107 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 PLRG1O43660 514 aaKnown RBP23.52■■□□□ 1.36
HOXB3-201ENST00000311626 CPMP14384 443 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 HCCSP53701 268 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 RPS15AP62244 130 aaKnown RBP23.52■■□□□ 1.36
HOXB3-201ENST00000311626 FRMD1Q8N878 549 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 TMEM239Q8WW34 195 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 OR2A5Q96R48 311 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 GDF15Q99988 308 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 TMEM43Q9BTV4 400 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 HDHD2Q9H0R4 259 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 SFXN1Q9H9B4 322 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 GDE1Q9NZC3 331 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 MAT2BQ9NZL9 334 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 OR6C2Q9NZP2 312 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 DAPP1Q9UN19 280 aa23.52■■□□□ 1.36
HOXB3-201ENST00000311626 ARHGEF17Q96PE2 2063 aaPredicted RBP23.52■■□□□ 1.36
HOXB3-201ENST00000311626 A0A1W2PPK0 400 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 FGF17O60258 216 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 RFPL3O75679 317 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 RASGRP1O95267 797 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 PAHP00439 452 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 SAGP10523 405 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 ACVR1BP36896 505 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 TMEM196Q5HYL7 178 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 DCST2Q5T1A1 773 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 MEPCEQ7L2J0 689 aaKnown RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 VASH1Q7L8A9 365 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 NR4A3Q92570 626 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 KIAA1143Q96AT1 154 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 MYADMQ96S97 322 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 CD180Q99467 661 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 RMI1Q9H9A7 625 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 RBFOX1Q9NWB1 397 aaKnown RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 BABAM2Q9NXR7 383 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 KLF15Q9UIH9 416 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 ZNF223Q9UK11 482 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 DOCK8Q8NF50 2099 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 J3QRE1 110 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 GNB5O14775 395 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 KIR2DL1P43626 348 aaPredicted RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 RNASE12Q5GAN4 147 aaKnown RBP23.51■■□□□ 1.35
HOXB3-201ENST00000311626 OR13C5Q8NGS8 318 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 HS6ST2Q96MM7 605 aa23.51■■□□□ 1.35
HOXB3-201ENST00000311626 TRAPPC13A5PLN9 417 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 OR6C74A6NCV1 312 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 CT62P0C5K7 136 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 ALAS2P22557 587 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 AGFG1P52594 562 aaKnown RBP23.5■■□□□ 1.35
HOXB3-201ENST00000311626 FCRL6Q6DN72 434 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 SYCE2Q6PIF2 218 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 RANBP3LQ86VV4 465 aaPredicted RBP23.5■■□□□ 1.35
HOXB3-201ENST00000311626 GHDCQ8N2G8 530 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 SLC37A3Q8NCC5 494 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 HERVK_113Q902F9 699 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 GALNT9Q9HCQ5 603 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 RWDD3Q9Y3V2 267 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 ANKRD34BA5PLL1 514 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 BHLHE40O14503 412 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 B3GALT2O43825 422 aa23.5■■□□□ 1.35
HOXB3-201ENST00000311626 RGS9O75916 674 aaPredicted RBP23.5■■□□□ 1.35
HOXB3-201ENST00000311626 PRKAR1AP10644 381 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms