RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 PTNP21246 168 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TPMTP51580 245 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 LUMP51884 338 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 CRYZQ08257 329 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SPCS2Q15005 226 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 LRRC25Q8N386 305 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ARFGAP1Q8N6T3 406 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR9Q2Q8NGE9 314 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR2M2Q96R28 347 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ASF1BQ9NVP2 202 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 EMCNQ9ULC0 261 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 C2orf16Q68DN1 1984 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 DOCK8Q8NF50 2099 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 HYKKA2RU49 373 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 RNGTTO60942 597 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SPDEFO95238 335 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 CDK2P24941 298 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 RPS26P62854 115 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLAMF1Q13291 335 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 APOFQ13790 326 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 LETMD1Q6P1Q0 360 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 TBC1D15Q8TC07 691 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC25A44Q96H78 314 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 METTL2AQ96IZ6 378 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 APMAPQ9HDC9 416 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 GPR45Q9Y5Y3 372 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 PTPRDP23468 1912 aa11.13□□□□□ -0.63
SYNGAP1-201ENST00000293748 ANKRD12Q6UB98 2062 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 K7ERQ8 282 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 UBFD1O14562 309 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 CSF1P09603 554 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 LSSP48449 732 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TAS2R38P59533 333 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TATDN3Q17R31 274 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 CADM4Q8NFZ8 388 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 MUL1Q969V5 352 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 F2RL3Q96RI0 385 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 SRA1Q9HD15 236 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 THSD1Q9NS62 852 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 NPAP1Q9NZP6 1156 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 NUP210Q8TEM1 1887 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 GOSR2O14653 212 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 BPNT1O95861 308 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 IFNA10P01566 189 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ALDOBP05062 364 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 PTPN6P29350 595 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 CASP3P42574 277 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 GAB4Q2WGN9 574 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 CATSPEREQ5SY80 951 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 METAP1DQ6UB28 335 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 LINC00299Q6ZSB3 139 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEFF1Q8IYR6 380 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 NRSN1Q8IZ57 195 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 NAGSQ8N159 534 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 METTL4Q8N3J2 472 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 MAL2Q969L2 176 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 VRK1Q99986 396 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ALG8Q9BVK2 526 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 SLC12A9Q9BXP2 914 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 HDAC8Q9BY41 377 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 PTGES2Q9H7Z7 377 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ENY2Q9NPA8 101 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM98Q9Y2Y6 226 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 VEGFDO43915 354 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TNFP01375 233 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 UGT2B7P16662 529 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 MAOAP21397 527 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 CERS1P27544 350 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 LRFN4Q6PJG9 635 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 COMMD6Q7Z4G1 85 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 KCTD20Q7Z5Y7 419 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ASPGQ86U10 573 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 DEFB119Q8N690 84 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TMEM185AQ8NFB2 350 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR2A12Q8NGT7 310 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 C16orf58Q96GQ5 468 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 PARPBPQ9NWS1 579 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZNF226Q9NYT6 803 aa11.12□□□□□ -0.63
SYNGAP1-201ENST00000293748 TEX51A0A1B0GUA7 166 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 DIRAS3O95661 229 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 AKR1C4P17516 323 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 CPOXP36551 454 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ERVK-25P63136 954 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 PCGF3Q3KNV8 242 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 NRMQ8IXM6 262 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 OR13F1Q8NGS4 319 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 C16orf78Q8WTQ4 265 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ZDHHC1Q8WTX9 485 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 ADAMTS14Q8WXS8 1223 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 KLHDC7BQ96G42 594 aa11.11□□□□□ -0.63
SYNGAP1-201ENST00000293748 FAM46AQ96IP4 442 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms