RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CLEC12AQ5QGZ9 265 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 GUSBP11Q6P575 273 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 TMPRSS11FQ6ZWK6 438 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 TMPRSS9Q7Z410 1059 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CMIPQ8IY22 773 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MAML2Q8IZL2 1156 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CDK20Q8IZL9 346 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 LSMEM1Q8N8F7 131 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF321PQ8N8H1 164 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PFN4Q8NHR9 129 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 WDR36Q8NI36 951 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 EDAQ92838 391 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 RPL3LQ92901 407 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CLIP3Q96DZ5 547 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MGLLQ99685 303 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 TEX12Q9BXU0 123 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PRRG3Q9BZD7 231 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 DPH1Q9BZG8 443 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ATP13A2Q9NQ11 1180 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 FSCN3Q9NQT6 498 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 SIDT1Q9NXL6 827 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MED31Q9Y3C7 131 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 U3KQA8 63 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 A0A1B0GX78 115 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 TCRBV16S1A1N1A0A5B0 115 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 KDM4EB2RXH2 506 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 SURF4O15260 269 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PRODHO43272 600 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 SIGLEC6O43699 453 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CHP2O43745 196 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 DYRK3O43781 588 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PRKNO60260 465 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 DDAH2O95865 285 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 INHBBP09529 407 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CKMT1AP12532 417 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 GADD45AP24522 165 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 RORAP35398 523 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 RGS6P49758 472 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 EFNA3P52797 238 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 GAS1P54826 345 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MLLT10P55197 1068 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CTBP2P56545 445 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 NCS1P62166 190 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MED22Q15528 200 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ELAVL1Q15717 326 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PGGHGQ32M88 737 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 KLHL26Q53HC5 615 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 C1orf189Q5VU69 101 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 SLC30A6Q6NXT4 461 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 SLC34A3Q8N130 599 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CYP4Z2PQ8N1L4 340 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 NANOGP1Q8N7R0 232 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 FAM181AQ8N9Y4 354 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 OR52I1Q8NGK6 324 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 NDNFQ8TB73 568 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 BRIX1Q8TDN6 353 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ZNF721Q8TF20 911 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 BPIFA2Q96DR5 249 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ARSGQ96EG1 525 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 HOXD1Q9GZZ0 328 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 UBQLN3Q9H347 655 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 PLGRKTQ9HBL7 147 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MEPEQ9NQ76 525 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 C20orf141Q9NUB4 165 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 MED17Q9NVC6 651 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CLEC2DQ9UHP7 191 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 DIMT1Q9UNQ2 313 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CFL2Q9Y281 166 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 ERGIC3Q9Y282 383 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 TMEM5Q9Y2B1 443 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 GPR52Q9Y2T5 361 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 LSM2Q9Y333 95 aaKnown RBP8.84□□□□□ -0.99
TRIM55-201ENST00000276573 CLCA3PQ9Y6N3 262 aa8.84□□□□□ -0.99
TRIM55-201ENST00000276573 A0A1W2PQM1 296 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 SNTNA6NMZ2 147 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 EFCAB7A8K855 629 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 EFCAB9A8MZ26 197 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 POLR1CO15160 346 aaPredicted RBP8.83□□□□□ -1
TRIM55-201ENST00000276573 AIREO43918 545 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 PTP4A3O75365 173 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 IL33O95760 270 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 CH25HO95992 272 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 CSTAP01040 98 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 IGKV3-11P04433 115 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 ZGLP1P0C6A0 271 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 HSMCR30P0CW71 290 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 FUT1P19526 365 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 GRK5P34947 590 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 UGT2B10P36537 528 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 ARHGAP40Q5TG30 622 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 AADACL4Q5VUY2 407 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 C19orf48Q6RUI8 117 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 LAPTM4BQ86VI4 370 aa8.83□□□□□ -1
TRIM55-201ENST00000276573 CACTIN-AS1Q8N1I8 211 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms