RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 NUP210LQ5VU65 1888 aa15.34■□□□□ 0.05
CCDC40-201ENST00000269318 A0A1B0GWA3 101 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 A0A1W2PQM1 296 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 CHP2O43745 196 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 FOXD2O60548 495 aaPredicted RBP15.33■□□□□ 0.05
CCDC40-201ENST00000269318 CNOT3O75175 753 aaKnown RBP15.33■□□□□ 0.05
CCDC40-201ENST00000269318 DDAH2O95865 285 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 ANKRD34CP0C6C1 535 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 MAKP20794 623 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 CSTF1Q05048 431 aaKnown RBP15.33■□□□□ 0.05
CCDC40-201ENST00000269318 VWA2Q5GFL6 755 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 C1orf189Q5VU69 101 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 RNLSQ5VYX0 342 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 SLC30A6Q6NXT4 461 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 CMIPQ8IY22 773 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 FAM181AQ8N9Y4 354 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 BRIX1Q8TDN6 353 aaKnown RBP15.33■□□□□ 0.05
CCDC40-201ENST00000269318 RPL3LQ92901 407 aaKnown RBP15.33■□□□□ 0.05
CCDC40-201ENST00000269318 TMEM80Q96HE8 168 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 SLC46A1Q96NT5 459 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 SLC38A2Q96QD8 506 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 OR5M11Q96RB7 305 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 ZNF426Q9BUY5 554 aa15.33■□□□□ 0.05
CCDC40-201ENST00000269318 CPED1A4D0V7 1026 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ZGLP1P0C6A0 271 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 CSTF2P33240 577 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 GAS1P54826 345 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 MLLT10P55197 1068 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 CTBP2P56545 445 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 FXYD6P3P58550 94 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 VBP1P61758 197 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 NCS1P62166 190 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 LSM3P62310 102 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ELAVL1Q15717 326 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 PGGHGQ32M88 737 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ARMCX4Q5H9R4 360 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ARHGAP40Q5TG30 622 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 CACTIN-AS1Q8N1I8 211 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 WDR36Q8NI36 951 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 NDNFQ8TB73 568 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 GRHL3Q8TE85 626 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ZNF721Q8TF20 911 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 LMF1Q96S06 567 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 DPYSL5Q9BPU6 564 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 PRRG3Q9BZD7 231 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 DPH1Q9BZG8 443 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 TRIM2Q9C040 744 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 ATP13A2Q9NQ11 1180 aa15.33■□□□□ 0.04
CCDC40-201ENST00000269318 MEPEQ9NQ76 525 aaPredicted RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 MRPS18AQ9NVS2 196 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 SIDT1Q9NXL6 827 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 LSM2Q9Y333 95 aaKnown RBP15.33■□□□□ 0.04
CCDC40-201ENST00000269318 SERINC4A6NH21 518 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 UNC119BA6NIH7 251 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 A8MUA0 341 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 KDM4EB2RXH2 506 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-201ENST00000269318 SURF4O15260 269 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 PRODHO43272 600 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 PRKNO60260 465 aaPredicted RBP15.32■□□□□ 0.04
CCDC40-201ENST00000269318 INHBBP09529 407 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 IFI30P13284 250 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 PPICP45877 212 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 PRPF38BQ5VTL8 546 aaKnown RBP15.32■□□□□ 0.04
CCDC40-201ENST00000269318 TMPRSS11FQ6ZWK6 438 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 ZNF550Q7Z398 422 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 C7orf57Q8NEG2 295 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 SLC2A12Q8TD20 617 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 LGALS12Q96DT0 336 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 OR8D2Q9GZM6 311 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 GPR52Q9Y2T5 361 aa15.32■□□□□ 0.04
CCDC40-201ENST00000269318 POLR1CO15160 346 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CLPXO76031 633 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 FUT1P19526 365 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 TBXA2RP21731 343 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 RORAP35398 523 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 RGS6P49758 472 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CCL7P80098 99 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 KLHL26Q53HC5 615 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 LINC00114Q6XXX2 140 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 C1orf210Q8IVY1 113 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 OR52I1Q8NGK6 324 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 ADIPOR1Q96A54 375 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CLIP3Q96DZ5 547 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 SAMD8Q96LT4 415 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 HS6ST2Q96MM7 605 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 NXF5Q9H1B4 397 aaKnown RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 HHATLQ9HCP6 504 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 MKKSQ9NPJ1 570 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 SLC22A11Q9NSA0 550 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 MED17Q9NVC6 651 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CLEC2DQ9UHP7 191 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 TMEM5Q9Y2B1 443 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 MED31Q9Y3C7 131 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 CLCA3PQ9Y6N3 262 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 PI4KAP42356 2102 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
CCDC40-201ENST00000269318 YKT6O15498 198 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 DYRK3O43781 588 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 RFPL3O75679 317 aa15.31■□□□□ 0.04
CCDC40-201ENST00000269318 GADD45AP24522 165 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms