RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PRAMEF8Q5VWM4 474 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PRAMEF7Q5VXH5 474 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 SLC30A6Q6NXT4 461 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 C1orf94Q6P1W5 598 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 SHFQ7M4L6 423 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 TMEM151BQ8IW70 566 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 DTX3Q8N9I9 347 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PFN4Q8NHR9 129 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 WDR36Q8NI36 951 aaKnown RBP12.58□□□□□ -0.4
VMP1-201ENST00000262291 ZNF675Q8TD23 568 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 CNOT9Q92600 299 aaKnown RBP12.58□□□□□ -0.4
VMP1-201ENST00000262291 CTHRC1Q96CG8 243 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PTCHD1Q96NR3 888 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.58□□□□□ -0.4
VMP1-201ENST00000262291 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 SPEF1Q9Y4P9 236 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PI4KAP42356 2102 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 LOC100506127A0A0U1RQW1 187 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 LILRA5A6NI73 299 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 SRPX2O60687 465 aaPredicted RBP12.58□□□□□ -0.4
VMP1-201ENST00000262291 GABARAPO95166 117 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 GADD45AP24522 165 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 ACVR2AP27037 513 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 CSF2RBP32927 897 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 GIPRP48546 466 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 EMDP50402 254 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 AFF3P51826 1226 aaKnown RBP12.58□□□□□ -0.4
VMP1-201ENST00000262291 GPLD1P80108 840 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PSG6Q00889 435 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 BNC1Q01954 994 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 ST3GAL3Q11203 375 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 SNAPC1Q16533 368 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 FLYWCH1Q4VC44 716 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 C12orf73Q69YU5 71 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 MCFD2Q8NI22 146 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 DYNC2LI1Q8TCX1 351 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 PLCXD1Q9NUJ7 323 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 FKBP14Q9NWM8 211 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 CLDN16Q9Y5I7 305 aa12.58□□□□□ -0.4
VMP1-201ENST00000262291 ZDBF2Q9HCK1 2354 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 A0A087WV62 115 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 CDC42EP2O14613 210 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 ADAM11O75078 769 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 CD1CP29017 333 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 ARL4DP49703 201 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 FAM53BQ14153 422 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 NDUFA9Q16795 377 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 ZFP69Q49AA0 526 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 MINDY4Q4G0A6 757 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 OR6F1Q8NGZ6 308 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 OTULINQ96BN8 352 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 DGAT2Q96PD7 388 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 TSSK6Q9BXA6 273 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
VMP1-201ENST00000262291 ATP13A2Q9NQ11 1180 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 PNO1Q9NRX1 252 aaKnown RBP12.57□□□□□ -0.4
VMP1-201ENST00000262291 ATXN7L1Q9ULK2 861 aaPredicted RBP12.57□□□□□ -0.4
VMP1-201ENST00000262291 OR2B3O76000 313 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 OMPP47874 163 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 NPSR1Q6W5P4 371 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 SHISA6Q6ZSJ9 500 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 C17orf82Q86X59 251 aaPredicted RBP12.57□□□□□ -0.4
VMP1-201ENST00000262291 GATSQ8NAP1 163 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 FAM174AQ8TBP5 190 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 TSLPQ969D9 159 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 LRR1Q96L50 414 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 NUDT22Q9BRQ3 303 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 SAP130Q9H0E3 1048 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 C20orf141Q9NUB4 165 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 COQ3Q9NZJ6 369 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 ENOPH1Q9UHY7 261 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 SATB2Q9UPW6 733 aa12.57□□□□□ -0.4
VMP1-201ENST00000262291 IGHV1OR21-1A0A087WYE8 117 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 SLC22A1O15245 554 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 SLC2A10O95528 541 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 AGR2O95994 175 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 FOLR1P15328 257 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 ZNF91Q05481 1191 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 CDK10Q15131 360 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 OR1Q1Q15612 314 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 B3GLCTQ6Y288 498 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 SLC34A3Q8N130 599 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 OR2I1PQ8NGU4 316 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 PIGXQ8TBF5 258 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 ITPAQ9BY32 194 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 DPH1Q9BZG8 443 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 OR51E2Q9H255 320 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 SYNDIG1Q9H7V2 258 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 TRIM45Q9H8W5 580 aaPredicted RBP12.56□□□□□ -0.4
VMP1-201ENST00000262291 ZBTB20Q9HC78 741 aaPredicted RBP12.56□□□□□ -0.4
VMP1-201ENST00000262291 DUSP22Q9NRW4 184 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 CTNSO60931 367 aa12.56□□□□□ -0.4
VMP1-201ENST00000262291 NID1P14543 1247 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms