RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TGM3Q08188 693 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 GRK1Q15835 563 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 ATAT1Q5SQI0 421 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 GAL3ST3Q96A11 431 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 SLC35A4Q96G79 324 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 SYNDIG1Q9H7V2 258 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 ZFP64Q9NPA5 681 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 ZNF624Q9P2J8 865 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-201ENST00000261963 A0A0A6YYJ9 748 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 CPSF4LA6NMK7 179 aaKnown RBP21.04■□□□□ 0.96
MCF2L-201ENST00000261963 FAM170BA6NMN3 283 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 STK25O00506 426 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 SLC30A4O14863 429 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 FCMRO60667 390 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 RAB36O95755 333 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 HK1P19367 917 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 CLLU1Q5K131 121 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 GPR139Q6DWJ6 353 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 FAM111BQ6SJ93 734 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 MRGPREQ86SM8 312 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 TM9SF4Q92544 642 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 WACQ9BTA9 647 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 ACTRT3Q9BYD9 372 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 HEXA-AS1Q9H8Q6 139 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 CNIH4Q9P003 139 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 LIPT1Q9Y234 373 aa21.04■□□□□ 0.96
MCF2L-201ENST00000261963 LAMP2P13473 410 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 AGFG1P52594 562 aaKnown RBP21.03■□□□□ 0.96
MCF2L-201ENST00000261963 PDX1P52945 283 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 MAP4K2Q12851 820 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 RIN1Q13671 783 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 CCDC85BQ15834 202 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-201ENST00000261963 C6orf132Q5T0Z8 1188 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 OR7G2Q8NG99 324 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 CCL4L1Q8NHW4 92 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 FLVCR1-AS1Q8TAF5 88 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 TOE1Q96GM8 510 aaKnown RBP21.03■□□□□ 0.96
MCF2L-201ENST00000261963 SAP130Q9H0E3 1048 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 NTNG1Q9Y2I2 539 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 H0Y8X5 98 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 CASKO14936 926 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 IFNA7P01567 189 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 TRAM2Q15035 370 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 QSOX2Q6ZRP7 698 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 GNPDA2Q8TDQ7 276 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 SORCS2Q96PQ0 1159 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 PPA2Q9H2U2 334 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 EMC7Q9NPA0 242 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 ZNF222Q9UK12 451 aa21.03■□□□□ 0.96
MCF2L-201ENST00000261963 SCN3AQ9NY46 2000 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 UBXN7O94888 489 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 APOL3O95236 402 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 RPS15AP62244 130 aaKnown RBP21.02■□□□□ 0.96
MCF2L-201ENST00000261963 MLLT1Q03111 559 aaPredicted RBP21.02■□□□□ 0.96
MCF2L-201ENST00000261963 TSPAN31Q12999 210 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 GARNL3Q5VVW2 1013 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 FBXO42Q6P3S6 717 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 MTSS1LQ765P7 747 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 ASPGQ86U10 573 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 SLC16A11Q8NCK7 471 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 CDCA3Q99618 268 aaPredicted RBP21.02■□□□□ 0.96
MCF2L-201ENST00000261963 TM9SF2Q99805 663 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 MRPS18AQ9NVS2 196 aaKnown RBP21.02■□□□□ 0.96
MCF2L-201ENST00000261963 GPR52Q9Y2T5 361 aa21.02■□□□□ 0.96
MCF2L-201ENST00000261963 OMPP47874 163 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 AVPR1BP47901 424 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 KIAA1024LP59773 190 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 CTAG1AP78358 180 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 BAMBIQ13145 260 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 C3orf38Q5JPI3 329 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 HEPHL1Q6MZM0 1159 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 SLC27A4Q6P1M0 643 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 ENPP7Q6UWV6 458 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 TEX47Q8TBZ9 253 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 NT5CQ8TCD5 201 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 FAM46AQ96IP4 442 aaKnown RBP21.02■□□□□ 0.95
MCF2L-201ENST00000261963 CLEC4MQ9H2X3 399 aaPredicted RBP21.02■□□□□ 0.95
MCF2L-201ENST00000261963 PTTG3PQ9NZH4 202 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 CALML5Q9NZT1 146 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 KCMF1Q9P0J7 381 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 SLC13A4Q9UKG4 626 aa21.02■□□□□ 0.95
MCF2L-201ENST00000261963 TRBV23OR9-2A0A075B6M9 112 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 RPS10-NUDT3A0A1W2PQS6 291 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 THY1P04216 161 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 PRKAR1BP31321 381 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 FGFBP1Q14512 234 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 MFSD12Q6NUT3 480 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 RASSF6Q6ZTQ3 369 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 TRILQ7L0X0 811 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 RD3Q7Z3Z2 195 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 DNAJC5GQ8N7S2 189 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 ATF6BQ99941 703 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 DPCDQ9BVM2 203 aaPredicted RBP21.01■□□□□ 0.95
MCF2L-201ENST00000261963 CD93Q9NPY3 652 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 NTMQ9P121 344 aa21.01■□□□□ 0.95
MCF2L-201ENST00000261963 P2RX6O15547 441 aa21■□□□□ 0.95
MCF2L-201ENST00000261963 PRODHO43272 600 aa21■□□□□ 0.95
MCF2L-201ENST00000261963 DNAJB6O75190 326 aa21■□□□□ 0.95
MCF2L-201ENST00000261963 PRKACAP17612 351 aa21■□□□□ 0.95
MCF2L-201ENST00000261963 ATP12AP54707 1039 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms