RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 KCNJ13O60928 360 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 PTP4A3O75365 173 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 CKMP06732 381 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 PUS10Q3MIT2 529 aaKnown RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 METTL11BQ5VVY1 283 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ESPNLQ6ZVH7 1005 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 PRSS45Q7RTY3 260 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ZNF740Q8NDX6 193 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ATOH1Q92858 354 aaPredicted RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 AHCYL2Q96HN2 611 aaKnown RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC6A17Q9H1V8 727 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 AUNIPQ9H7T9 357 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 IFT22Q9H7X7 185 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 HPF1Q9NWY4 346 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 C5AR2Q9P296 337 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 CA5BQ9Y2D0 317 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ATG2AQ2TAZ0 1938 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 A0A0B4J203 849 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ZNF98A6NK75 572 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 GMDSO60547 372 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 PLATP00750 562 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 GIPP09681 153 aaPredicted RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 CALCRP30988 508 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 GDNFP39905 211 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 CCR8P51685 355 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 PGGHGQ32M88 737 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 ACBD7Q8N6N7 88 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 OR4D9Q8NGE8 314 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 OR5W2Q8NH69 310 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 DMRTA2Q96SC8 542 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 TBX5Q99593 518 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 OR10A4Q9H209 315 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 HINT3Q9NQE9 182 aaKnown RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 MED17Q9NVC6 651 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 MRPL15Q9P015 296 aaKnown RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 H2AFY2Q9P0M6 372 aaPredicted RBP16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 GPR160Q9UJ42 338 aa16.48■□□□□ 0.23
CDKN1B-201ENST00000228872 A0A1B0GUH1 482 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 ANXA2P2A6NMY6 339 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 PGRMC2O15173 223 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 FGF19O95750 216 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SNRPBP14678 240 aaKnown RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 MYOGP15173 224 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 BUD31P41223 144 aaPredicted RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 OMPP47874 163 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 HTR4Q13639 388 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 B3GNTL1Q67FW5 361 aaPredicted RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 TMEM99Q8N816 258 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 PIGKQ92643 395 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 OSTF1Q92882 214 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 USB1Q9BQ65 265 aaKnown RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SEC22CQ9BRL7 303 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 TMPRSS13Q9BYE2 586 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SUV39H2Q9H5I1 410 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 TRIM36Q9NQ86 728 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 NANSQ9NR45 359 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 GRM6O15303 877 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 CCL16O15467 120 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SUSD5O60279 629 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SELENOFO60613 162 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 XPAP23025 273 aaPredicted RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 MAZP56270 477 aaKnown RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SPRED2Q7Z698 418 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 CPOQ8IVL8 374 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SPICQ8N5J4 248 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM98AQ8NCA5 519 aaKnown RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 ABHD4Q8TB40 342 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SMIM4Q8WVI0 70 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 SORCS1Q8WY21 1168 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 TEX12Q9BXU0 123 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 LSM7Q9UK45 103 aaKnown RBP16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 CAMK2AQ9UQM7 478 aa16.47■□□□□ 0.23
CDKN1B-201ENST00000228872 E9PI62 339 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 GALR3O60755 368 aaPredicted RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PDHA2P29803 388 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 CTSCP53634 463 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 TAS2R41P59536 307 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 TMEM255AQ5JRV8 349 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 C9orf50Q5SZB4 431 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 EIF4E3Q8N5X7 224 aaKnown RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 RGMAQ96B86 450 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 WDR89Q96FK6 387 aaPredicted RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 UQCC2Q9BRT2 126 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 TEX10Q9NXF1 929 aaPredicted RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 TRPC4Q9UBN4 977 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC5A10A0PJK1 596 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 OR2M5A3KFT3 312 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM183AA6NL82 134 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 ABCD4O14678 606 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 RP2O75695 350 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 APOC3P02656 99 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 GJA1P17302 382 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PSMB1P20618 241 aaKnown RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PPP2R1BP30154 601 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 RAD52P43351 418 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 CCR9P51686 369 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 PCBP4P57723 403 aaKnown RBP16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 SLC3A1Q07837 685 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 FAM69AQ5T7M9 428 aa16.46■□□□□ 0.23
CDKN1B-201ENST00000228872 OR5M10Q6IEU7 315 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms