RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ATXN7L1Q9ULK2 861 aaPredicted RBP13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 CLCA3PQ9Y6N3 262 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 CABIN1Q9Y6J0 2220 aa13.21□□□□□ -0.3
RTFDC1-201ENST00000023939 IGHV5-10-1A0A0J9YXX1 117 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 SERINC4A6NH21 518 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 PIP5K1CO60331 668 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 IL33O95760 270 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 CER1O95813 267 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 CFIP05156 583 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 RFX3P48380 749 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 EFNA3P52797 238 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 KLHL26Q53HC5 615 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 P2RY8Q86VZ1 359 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM163Q8TC26 289 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC2A12Q8TD20 617 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 DAZLQ92904 295 aaKnown RBP13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 TEX12Q9BXU0 123 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 DNAJC27Q9NZQ0 273 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 FLRT3Q9NZU0 649 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 SELENONQ9NZV5 590 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC35A3Q9Y2D2 325 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 ASXL3Q9C0F0 2248 aa13.2□□□□□ -0.3
RTFDC1-201ENST00000023939 A0A1B0GWA3 101 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 M0R082 166 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC22A1O15245 554 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TLX2O43763 284 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ADORA3P0DMS8 318 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CKMT1AP12532 417 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TGFBR2P37173 567 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 GPR4P46093 362 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF91Q05481 1191 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SNAPC1Q16533 368 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 VWA2Q5GFL6 755 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 RPL13AP3Q6NVV1 102 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC23A3Q6PIS1 610 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 LINC00114Q6XXX2 140 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 COX15Q7KZN9 410 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF367Q7RTV3 350 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 EID2Q8N6I1 236 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 DTWD2Q8NBA8 298 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 FAM71CQ8NEG0 241 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 OR4C3Q8NH37 302 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ADIPOR1Q96A54 375 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 LCORQ96JN0 433 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TSSK6Q9BXA6 273 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 VN1R1Q9GZP7 353 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 UBQLN4Q9NRR5 601 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC22A11Q9NSA0 550 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 MRTO4Q9UKD2 239 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 MED31Q9Y3C7 131 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 UNC119BA6NIH7 251 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 OR6C76A6NM76 312 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SNTNA6NMZ2 147 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 KDM4EB2RXH2 506 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CDC42EP2O14613 210 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TO15178 435 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 MAN1A2O60476 641 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ADAM11O75078 769 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 HMGN1P05114 100 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 DBTP11182 482 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 PSPHP78330 225 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 AQP6Q13520 282 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 NSDHLQ15738 373 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TIGD6Q17RP2 521 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 FNDC7Q5VTL7 733 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 C1orf189Q5VU69 101 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 BPHLQ86WA6 291 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CDK20Q8IZL9 346 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CYP4Z2PQ8N1L4 340 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SLC43A2Q8N370 569 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF614Q8N883 585 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF321PQ8N8H1 164 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM80Q96HE8 168 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 LRR1Q96L50 414 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 ZNF582Q96NG8 517 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 CCNL2Q96S94 520 aaPredicted RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 NUDT9Q9BW91 350 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 TBC1D23Q9NUY8 699 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 SIDT1Q9NXL6 827 aaKnown RBP13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 UNC13CQ8NB66 2214 aa13.19□□□□□ -0.3
RTFDC1-201ENST00000023939 COL5A1P20908 1838 aaPredicted RBP13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 RP1P56715 2156 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 ARHGAP33O14559 1287 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 PRODHO43272 600 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 CSTAP01040 98 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 PTHP01270 115 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 IFI30P13284 250 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 CSTF2P33240 577 aaKnown RBP eCLIP13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 NNATQ16517 81 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 PGGHGQ32M88 737 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 ULK3Q6PHR2 472 aa13.18□□□□□ -0.3
RTFDC1-201ENST00000023939 TMEM105Q8N8V8 129 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms