RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 FAM46CQ5VWP2 391 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 IL20RBQ6UXL0 311 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 QSOX2Q6ZRP7 698 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 GPAT4Q86UL3 456 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 TSACCQ96A04 125 aaPredicted RBP12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 OTULINQ96BN8 352 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 NEURL3Q96EH8 262 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 MENTQ9BUN1 341 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 HDAC8Q9BY41 377 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 KLHL21Q9UJP4 597 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 CLCA2Q9UQC9 943 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 GSTK1Q9Y2Q3 226 aa12.52□□□□□ -0.41
PCDHB17P-202ENST00000623466 K7EQS6 105 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 F8A1P23610 371 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 BUD31P41223 144 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 RNF144AP50876 292 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CCR8P51685 355 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 KIAA1161Q6NSJ0 714 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ZNF793Q6ZN11 406 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ZNF765Q7L2R6 523 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SLC37A3Q8NCC5 494 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 AP3S1Q92572 193 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SMAD5Q99717 465 aaKnown RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ATF6BQ99941 703 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 HDHD2Q9H0R4 259 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 FGF22Q9HCT0 170 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 EQTNQ9NQ60 294 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 EMC3Q9P0I2 261 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 PRELID3BQ9Y3B1 194 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ARHGEF17Q96PE2 2063 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 LINC00587B1AMM8 73 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 LANCL1O43813 399 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 GMDSO60547 372 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ADAM11O75078 769 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 GLAP06280 429 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 FAM157BP0CG42 384 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 NR2F1P10589 423 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 COL9A1P20849 921 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SSR2P43308 183 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 MTNR1AP48039 350 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CSNK1G2P78368 415 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ZNF542PQ5EBM4 170 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 MZT2BQ6NZ67 158 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 LRFN4Q6PJG9 635 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 RTL10Q7L3V2 364 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 HDDC2Q7Z4H3 204 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CCDC116Q8IYX3 515 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 FBXO15Q8NCQ5 510 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 NEIL3Q8TAT5 605 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CAMK1GQ96NX5 476 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 MS4A8Q9BY19 250 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 GDE1Q9NZC3 331 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SSX5O60225 188 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 CEACAM5P06731 702 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 GBX2P52951 348 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 RRAS2P62070 204 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 LCTLQ6UWM7 567 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ADAMTSL4Q6UY14 1074 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 TMEFF1Q8IYR6 380 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 OR52E1Q8NGJ3 308 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 OR8D4Q8NGM9 314 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 OR2A1Q8NGT9 310 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SMPDL3AQ92484 453 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 WDR34Q96EX3 536 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 LINC00052Q96N35 136 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 DPH7Q9BTV6 452 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SLC17A9Q9BYT1 436 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 PITHD1Q9GZP4 211 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 SAP130Q9H0E3 1048 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 RANBP3Q9H6Z4 567 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 DCAF16Q9NXF7 216 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ELF5Q9UKW6 265 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 AUP1Q9Y679 476 aa12.51□□□□□ -0.41
PCDHB17P-202ENST00000623466 ERI3O43414 337 aaKnown RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 HMGN1P05114 100 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 RPL3P39023 403 aaKnown RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 EVX1P49640 407 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 PPP3R1P63098 170 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 DUSP2Q05923 314 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 TPBGQ13641 420 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 C18orf63Q68DL7 685 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 C9orf62Q8N4C0 152 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 SETD7Q8WTS6 366 aaKnown RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 RBPMSQ93062 196 aaKnown RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 ARSGQ96EG1 525 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 TMEM43Q9BTV4 400 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 OR51I1Q9H343 314 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 HPF1Q9NWY4 346 aa12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 PCDHGA9Q9Y5G4 932 aaKnown RBP12.5□□□□□ -0.41
PCDHB17P-202ENST00000623466 F8W036 122 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms