RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZNF708P17019 499 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 ZNF17P17021 662 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 CAPN3P20807 821 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 RPS4Y1P22090 263 aaKnown RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 DPP4P27487 766 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 CEACAM8P31997 349 aaPredicted RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 SOAT1P35610 550 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 TIMP3P35625 211 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 MDH1P40925 334 aaKnown RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 KHKP50053 298 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 SMSP52788 366 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 NUP107P57740 925 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 GUCY1A3Q02108 690 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 PLAURQ03405 335 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 SQLEQ14534 574 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 ZNF630Q2M218 657 aaPredicted RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 FLYWCH1Q4VC44 716 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 TIGD2Q4W5G0 525 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 HSP90B2PQ58FF3 399 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 COX20Q5RI15 118 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 C1orf185Q5T7R7 199 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 RIPPLY2Q5TAB7 128 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 NSUN5P2Q63ZY6 315 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 B3GNT6Q6ZMB0 384 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 C3P1Q6ZMU1 363 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 FRRS1Q6ZNA5 592 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 NCCRP1Q6ZVX7 275 aaPredicted RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 IFNEQ86WN2 208 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 RNF130Q86XS8 419 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 OR4K17Q8NGC6 315 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 OR5M9Q8NGP3 310 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 OR14L1PQ8NHC6 308 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 TSPEARQ8WU66 669 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 ROPN1LQ96C74 230 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 ITCHQ96J02 903 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 TRNT1Q96Q11 434 aaKnown RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 TREX2Q9BQ50 279 aaPredicted RBP7.47□□□□□ -1.21
NEK3-209ENST00000618856 KLHDC3Q9BQ90 382 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 RABEP2Q9H5N1 569 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 PTGES2Q9H7Z7 377 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 RMND5AQ9H871 391 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 CALHM2Q9HA72 323 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 NPHS2Q9NP85 383 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 EXD2Q9NVH0 621 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 SLC25A37Q9NYZ2 338 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 ACAD8Q9UKU7 415 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 LIPT1Q9Y234 373 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 DTNAQ9Y4J8 743 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 DSPPQ9NZW4 1301 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 FBN2P35556 2912 aa7.47□□□□□ -1.21
NEK3-209ENST00000618856 FREM3P0C091 2139 aa7.46□□□□□ -1.21
NEK3-209ENST00000618856 MYO7BQ6PIF6 2116 aa7.46□□□□□ -1.21
NEK3-209ENST00000618856 TACC2O95359 2948 aa7.46□□□□□ -1.21
NEK3-209ENST00000618856 MAST4O15021 2626 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 C15orf38-AP3S2A0A0A6YYH1 394 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 CENPVL1A0A0U1RR11 272 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 OR2M5A3KFT3 312 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 MBD3L4A6NDZ8 208 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 MBD3L3A6NE82 208 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 SERINC4A6NH21 518 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 MBD3L5A6NJ08 208 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 KDM4EB2RXH2 506 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 OIP5O43482 229 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 EIF4E2O60573 245 aaKnown RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 TNFRSF21O75509 655 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 TFPTP0C1Z6 253 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ESRRAP11474 423 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 NID1P14543 1247 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 HK1P19367 917 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ATP6V1C1P21283 382 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 CHI3L1P36222 383 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 PGM1P36871 562 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 RFX3P48380 749 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 SUMO3P55854 103 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 STX1BP61266 288 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ZNF117Q03924 483 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 TFF3Q07654 80 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 PMPCAQ10713 525 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 FGFBP1Q14512 234 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 MAPK14Q16539 360 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 PLPPR5Q32ZL2 321 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 GTDC1Q4AE62 458 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 SLC25A53Q5H9E4 307 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 PAGE3Q5JUK9 113 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ZNF585AQ6P3V2 769 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 TNFAIP8L2Q6P589 184 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 AAGABQ6PD74 315 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 SLC2A7Q6PXP3 512 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 CBLN3Q6UW01 205 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ARSKQ6UWY0 536 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 DLEU7Q6UYE1 221 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 LRRC74BQ6ZQY2 392 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ZNF621Q6ZSS3 439 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 GGNQ86UU5 652 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 LACC1Q8IV20 430 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 GTPBP8Q8N3Z3 284 aaPredicted RBP7.46□□□□□ -1.22
NEK3-209ENST00000618856 DPP10Q8N608 796 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 ZNF527Q8NB42 609 aa7.46□□□□□ -1.22
NEK3-209ENST00000618856 TOR1AIP2Q8NFQ8 470 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms