RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 MED17Q9NVC6 651 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ATG2BQ96BY7 2078 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SZT2Q5T011 3432 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 NPIPA5A0A0B4J1W7 369 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 A0A0G2JMP0 313 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 A0A0X1KG70 313 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 GSAPA4D1B5 854 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 CENPBD1B2RD01 187 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 NPIPA7E9PJI5 369 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 GTPBP1O00178 669 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 RNGTTO60942 597 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 CPNE3O75131 537 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 NPIPA8P0DM63 369 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MAKP20794 623 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TBXA2RP21731 343 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SEC13P55735 322 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ACSM1Q08AH1 577 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MAPK14Q16539 360 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TMEM44Q2T9K0 475 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TRMT12Q53H54 448 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 FCRLBQ6BAA4 426 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ZNF425Q6IV72 752 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 CDC73Q6P1J9 531 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 RD3Q7Z3Z2 195 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 AMIGO1Q86WK6 493 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TMEFF1Q8IYR6 380 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 DUSP18Q8NEJ0 188 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 OR10H4Q8NGA5 316 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 OR4M2Q8NGB6 313 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MS4A4EQ96PG1 132 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ALG8Q9BVK2 526 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SLC17A9Q9BYT1 436 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 HDHD2Q9H0R4 259 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 CACYBPQ9HB71 228 aaKnown RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TMEM74BQ9NUR3 256 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 ASB6Q9NWX5 421 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 BABAM2Q9NXR7 383 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 EXTL2Q9UBQ6 330 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 TBC1D29Q9UFV1 150 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 SLC17A4Q9Y2C5 497 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MAU2Q9Y6X3 613 aa10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MUC22E2RYF6 1773 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-215ENST00000617482 MDC1Q14676 2089 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 SMLR1H3BR10 107 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 J3QRE1 110 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FAM157BP0CG42 384 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 C5AR1P21730 350 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TEAD1P28347 426 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 SHC1P29353 583 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 IGFALSP35858 605 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ZNF136P52737 540 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FXYD6P3P58550 94 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 EFR3AQ14156 821 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 YIF1BQ5BJH7 314 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 METAP1DQ6UB28 335 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ASB18Q6ZVZ8 466 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 NANOGNBQ7Z5D8 188 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 SDF2Q99470 211 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 KCNJ15Q99712 375 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TIMP4Q99727 224 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 PRSS27Q9BQR3 290 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 SARGQ9BW04 601 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FGF22Q9HCT0 170 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 RPRD1BQ9NQG5 326 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FBXO34Q9NWN3 711 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 LYARQ9NX58 379 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ZMAT5Q9UDW3 170 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 POLHQ9Y253 713 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 DAPL1A0PJW8 107 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ZNF860A6NHJ4 632 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 UNC119BA6NIH7 251 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 E9PI62 339 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 LANCL1O43813 399 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 RGS9O75916 674 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 IFI30P13284 250 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 AK4P27144 223 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TSFMP43897 325 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 RPS7P62081 194 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 RPS21P63220 83 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FAPQ12884 760 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ADAM15Q13444 863 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 CLPPQ16740 277 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TMEM240Q5SV17 173 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 NIPAL3Q6P499 406 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ARL9Q6T311 187 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 MEPCEQ7L2J0 689 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 OR4K14Q8NGD5 310 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 FANK1Q8TC84 345 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 ZC3HAV1LQ96H79 300 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 APOOQ9BUR5 198 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 C1QTNF2Q9BXJ5 285 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 MKRN2Q9H000 416 aaKnown RBP10.97□□□□□ -0.65
C11orf54-215ENST00000617482 OR51V1Q9H2C8 321 aa10.97□□□□□ -0.65
C11orf54-215ENST00000617482 SLA2Q9H6Q3 261 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms