RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CACYBPQ9HB71 228 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 POLMQ9NP87 494 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 SLC6A20Q9NP91 592 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 PRSS16Q9NQE7 514 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 BABAM2Q9NXR7 383 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 A0A1W2PS29 197 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GTPBP1O00178 669 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 RNF13O43567 381 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 PCDH8O95206 1070 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 AGR2O95994 175 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 ARSBP15848 533 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 ATF4P18848 351 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 SOX9P48436 509 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 CTBP2P56545 445 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 BTG1P62324 171 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GALEQ14376 348 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 INSL4Q14641 139 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 HEPHL1Q6MZM0 1159 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 CXXC5Q7LFL8 322 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GPAT4Q86UL3 456 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 ADGRG3Q86Y34 549 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 CPOQ8IVL8 374 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 SFTPA1Q8IWL2 248 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GANCQ8TET4 914 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 TMEM255BQ8WV15 326 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 CREB3L1Q96BA8 519 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 UPRTQ96BW1 309 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 GIMAP5Q96F15 307 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 HINT3Q9NQE9 182 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 MBNL1Q9NR56 388 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 MCUBQ9NWR8 336 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 LYARQ9NX58 379 aaKnown RBP13.67□□□□□ -0.22
CTCFL-219ENST00000608720 NTNG1Q9Y2I2 539 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 OR1A2Q9Y585 309 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 EYSQ5T1H1 3165 aa13.67□□□□□ -0.22
CTCFL-219ENST00000608720 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 INMT-MINDY4F8WBC2 141 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 AGRPO00253 132 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SOCS6O14544 535 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PRICKLE3O43900 615 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 FCMRO60667 390 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SCO1O75880 301 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SLC2A10O95528 541 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 THY1P04216 161 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 TPOP07202 933 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 TEAD1P28347 426 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PDX1P52945 283 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ERVK-21P61565 698 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 STXBP1P61764 594 aaKnown RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SNTA1Q13424 505 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ZNF57Q68EA5 555 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ABI3BPQ7Z7G0 1075 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 NRROSQ86YC3 692 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ACBD7Q8N6N7 88 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 MFSD9Q8NBP5 474 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SAMD8Q96LT4 415 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ZNF443Q9Y2A4 671 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 RNF215Q9Y6U7 377 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 TBC1D3BA6NDS4 549 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ANTXRLA6NF34 631 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ATP6V1G2-DDX39BF2Z307 99 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 BTN3A3O00478 584 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PIP5K1CO60331 668 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SERPINI2O75830 405 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 RAF1P04049 648 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 IFNA16P05015 189 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 HOXB3P14651 431 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PRKACAP17612 351 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 ELK1P19419 428 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PAICSP22234 425 aaKnown RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 RAB8AP61006 207 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 FZD5Q13467 585 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 GRK1Q15835 563 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 AANATQ16613 207 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 IDNKQ5T6J7 187 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 BICRALQ6AI39 1079 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SMARCD3Q6STE5 483 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 OR2L3Q8NG85 312 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 OR52E1Q8NGJ3 308 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 SPPL3Q8TCT6 385 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 BRIX1Q8TDN6 353 aaKnown RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 KAT2AQ92830 837 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 FCRL4Q96PJ5 515 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 C1QTNF2Q9BXJ5 285 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 UBQLN3Q9H347 655 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 FOLH1BQ9HBA9 442 aa13.66□□□□□ -0.22
CTCFL-219ENST00000608720 PHPT1Q9NRX4 125 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-219ENST00000608720 EXTL2Q9UBQ6 330 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms