RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 EXPH5Q8NEV8 1989 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 CFAP73A6NFT4 308 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 FAM47E-STBD1D6RA91 191 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZNF264O43296 627 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 SCO2O43819 266 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 CBR3O75828 277 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 PDE5AO76074 875 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 UBL4AP11441 157 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 SLC6A8P48029 635 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 SELENOWP63302 87 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 FGFBP1Q14512 234 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 INAQ16352 499 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 LRRC23Q53EV4 343 aaPredicted RBP13.07□□□□□ -0.32
SKA2-205ENST00000580541 PRAMEF20Q5VT98 475 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 RPUSD3Q6P087 351 aaKnown RBP13.07□□□□□ -0.32
SKA2-205ENST00000580541 DHRS4L2Q6PKH6 230 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZNF550Q7Z398 422 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 MARCH3Q86UD3 253 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZNF227Q86WZ6 799 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 GRAMD2AQ8IUY3 354 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 TOR1AIP2Q8NFQ8 470 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 DUSP19Q8WTR2 217 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 RNF138Q8WVD3 245 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZG16BQ96DA0 208 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 CRELD1Q96HD1 420 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 FRMD6Q96NE9 622 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 LAT2Q9GZY6 243 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 KLHL1Q9NR64 748 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 PACSIN3Q9UKS6 424 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZNF443Q9Y2A4 671 aaPredicted RBP13.07□□□□□ -0.32
SKA2-205ENST00000580541 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
SKA2-205ENST00000580541 ZFHX4Q86UP3 3567 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 NPIPA7E9PJI5 369 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 ACOT7O00154 380 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 SYT5O00445 386 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 ARPC2O15144 300 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 HCRTR2O43614 444 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 RASAL1O95294 804 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 ZIC2O95409 532 aaPredicted RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 NPIPA8P0DM63 369 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 SUMO3P55854 103 aaPredicted RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 CYBRD1Q53TN4 286 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 TIGD3Q6B0B8 471 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 FKBP9P1Q75LS8 142 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 GALNTL5Q7Z4T8 443 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 VRK2Q86Y07 508 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 PLCZ1Q86YW0 608 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 SULF2Q8IWU5 870 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 LSM14AQ8ND56 463 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 FAM156AQ8NDB6 213 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 OR2M7Q8NG81 312 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 OR4K17Q8NGC6 315 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 B4GALNT2Q8NHY0 566 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 PNPLA2Q96AD5 504 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 CCDC124Q96CT7 223 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 CLPTM1LQ96KA5 538 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 JSRP1Q96MG2 331 aaPredicted RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 QRSL1Q9H0R6 528 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 PCDHAC1Q9H158 963 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 ZFP64Q9NPA5 681 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 EXOSC3Q9NQT5 275 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 ZNF71Q9NQZ8 489 aaPredicted RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 DCAF13Q9NV06 445 aaKnown RBP13.06□□□□□ -0.32
SKA2-205ENST00000580541 USP22Q9UPT9 525 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 CACNA1GO43497 2377 aa13.06□□□□□ -0.32
SKA2-205ENST00000580541 EML6Q6ZMW3 1958 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 CACNA1BQ00975 2339 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 CDHR4A6H8M9 788 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 SNPHO15079 494 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 ZNF682O95780 498 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 SERPINA1P01009 418 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 CRYABP02511 175 aaKnown RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 NCK1P16333 377 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 IFNA8P32881 189 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 KCNJ5P48544 419 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 P2RX1P51575 399 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 GAS1P54826 345 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 COPZ1P61923 177 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 EEF1A1P68104 462 aaKnown RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 PLGLB1Q02325 96 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 KLRB1Q12918 225 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 CBFBQ13951 182 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 FLOT2Q14254 428 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 GANABQ14697 944 aaKnown RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 MAPK14Q16539 360 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 MRPL2Q5T653 305 aaKnown RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 LCN8Q6JVE9 175 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 APOOLQ6UXV4 268 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 CBLL1Q75N03 491 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 OLIG3Q7RTU3 272 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 SLC22A16Q86VW1 577 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 RBMXL3Q8N7X1 1067 aaKnown RBP13.05□□□□□ -0.32
SKA2-205ENST00000580541 TPD52L3Q96J77 140 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 UBL7Q96S82 380 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms