RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 CD300AQ9UGN4 299 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 ANAPC2Q9UJX6 822 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 USP22Q9UPT9 525 aa15.61■□□□□ 0.09
NUP88-210ENST00000574867 IGLV3-32A0A0A0MS00 114 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 PABPC4LP0CB38 370 aaKnown RBP15.6■□□□□ 0.09
NUP88-210ENST00000574867 CD226Q15762 336 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 RNF220Q5VTB9 566 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 TIGD3Q6B0B8 471 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 BHLHE22Q8NFJ8 381 aaPredicted RBP15.6■□□□□ 0.09
NUP88-210ENST00000574867 OR1J4Q8NGS1 313 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 PHOSPHO1Q8TCT1 267 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 JSRP1Q96MG2 331 aaPredicted RBP15.6■□□□□ 0.09
NUP88-210ENST00000574867 RTN4RQ9BZR6 473 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 ARMC7Q9H6L4 198 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 ZNF232Q9UNY5 417 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 ZNF443Q9Y2A4 671 aaPredicted RBP15.6■□□□□ 0.09
NUP88-210ENST00000574867 NBEAQ8NFP9 2946 aa15.6■□□□□ 0.09
NUP88-210ENST00000574867 PINLYPA6NC86 204 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 LRRC3CA6NJW4 275 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 ACOT7O00154 380 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 GSTA4O15217 222 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 UBL4AP11441 157 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 KCNJ10P78508 379 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 FXNQ16595 210 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 HYAL4Q2M3T9 481 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 PTRH1Q86Y79 214 aaKnown RBP15.59■□□□□ 0.09
NUP88-210ENST00000574867 PLCZ1Q86YW0 608 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 RNF148Q8N7C7 305 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 TTTY12Q9BZ98 90 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 LUZP4Q9P127 313 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 SEC14L3Q9UDX4 400 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 ATRXP46100 2492 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 GLSO94925 669 aaPredicted RBP15.59■□□□□ 0.09
NUP88-210ENST00000574867 CSTAP01040 98 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 CRYABP02511 175 aaKnown RBP15.59■□□□□ 0.09
NUP88-210ENST00000574867 MSX1P28360 303 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 PRKAR1BP31321 381 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 PLGLB1Q02325 96 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 CEACAM7Q14002 265 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 EIPR1Q53HC9 387 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 ZNF311Q5JNZ3 666 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 FAM180AQ6UWF9 173 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 HMGN2P46Q86SG4 172 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 SLC22A16Q86VW1 577 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 ARMC8Q8IUR7 673 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 WDSUB1Q8N9V3 476 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 GATSQ8NAP1 163 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 DUSP19Q8WTR2 217 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 RASSF5Q8WWW0 418 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 GMPR2Q9P2T1 348 aaKnown RBP15.59■□□□□ 0.09
NUP88-210ENST00000574867 C15orf41Q9Y2V0 281 aa15.59■□□□□ 0.09
NUP88-210ENST00000574867 C2orf72A6NCS6 295 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 GTPBP1O00178 669 aaKnown RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 CXCR6O00574 342 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 GNB5O14775 395 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 ZNF264O43296 627 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 EIF4E2O60573 245 aaKnown RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 GCM2O75603 506 aaPredicted RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 DNAJC8O75937 253 aaPredicted RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 IFNA14P01570 189 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 ZNF24P17028 368 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 GGT1P19440 569 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 SUMO3P55854 103 aaPredicted RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 NFATC3Q12968 1075 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 BNIP2Q12982 314 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 DHRS4L2Q6PKH6 230 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 VRK2Q86Y07 508 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 FAM71CQ8NEG0 241 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 TOR1AIP2Q8NFQ8 470 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 SLC39A7Q92504 469 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 LRMDAQ9H2I8 198 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 ZNF703Q9H7S9 590 aaPredicted RBP15.58■□□□□ 0.09
NUP88-210ENST00000574867 MAGEL2Q9UJ55 1249 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 PACSIN3Q9UKS6 424 aa15.58■□□□□ 0.09
NUP88-210ENST00000574867 IGSF10Q6WRI0 2623 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 SPTA1P02549 2419 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 NINQ8N4C6 2090 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 BOD1L1Q8NFC6 3051 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 HCRTR2O43614 444 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 GMNNO75496 209 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 CBR3O75828 277 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 MFN2O95140 757 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 EEF1A1P68104 462 aaKnown RBP15.58■□□□□ 0.08
NUP88-210ENST00000574867 PMP22Q01453 160 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 ZNF117Q03924 483 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 MRPL2Q5T653 305 aaKnown RBP15.58■□□□□ 0.08
NUP88-210ENST00000574867 ZNF836Q6ZNA1 936 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 FADS6Q8N9I5 356 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 OR4K17Q8NGC6 315 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 SLC26A7Q8TE54 656 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 FIG4Q92562 907 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 TAAR6Q96RI8 345 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 THTPAQ9BU02 230 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 PTGES2Q9H7Z7 377 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 EXOSC3Q9NQT5 275 aaKnown RBP15.58■□□□□ 0.08
NUP88-210ENST00000574867 QPCTLQ9NXS2 382 aa15.58■□□□□ 0.08
NUP88-210ENST00000574867 CDHR4A6H8M9 788 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 M0QX08 132 aa15.57■□□□□ 0.08
NUP88-210ENST00000574867 TCN1P20061 433 aaPredicted RBP15.57■□□□□ 0.08
NUP88-210ENST00000574867 KDELR2P33947 212 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms