RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 OR9A4Q8NGU2 314 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 IL1F10Q8WWZ1 152 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TUBGCP2Q9BSJ2 902 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 CDH9Q9ULB4 789 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 RNF24Q9Y225 148 aa2.06□□□□□ -2.08
CHD9-209ENST00000564255 TCF20Q9UGU0 1960 aaKnown RBP2.06□□□□□ -2.08
CHD9-209ENST00000564255 NACADO15069 1562 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 TRABD2BA6NFA1 517 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 OR6C65A6NJZ3 312 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZNF716A6NP11 495 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 A8MXK9 166 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 POP4O95707 220 aaKnown RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 TSPAN12O95859 305 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 RENP00797 406 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SERPINA3P01011 423 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZNF735P0CB33 412 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 UMPSP11172 480 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 RPL8P62917 257 aaKnown RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 PAX8Q06710 450 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 RAB40BQ12829 278 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 CYLC2Q14093 348 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 NDUFA9Q16795 377 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SLC5A12Q1EHB4 618 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SFT2D3Q587I9 215 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 PHYHD1Q5SRE7 291 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 FAAP20Q6NZ36 180 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SCYL2Q6P3W7 929 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ACOT1Q86TX2 421 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 TMEM123Q8N131 208 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 LINC01561Q8N1V8 128 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ABHD12Q8N2K0 398 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 Q8N377 158 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZNF248Q8NDW4 579 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 TPD52L3Q96J77 140 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZNF597Q96LX8 424 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 LRRC61Q9BV99 259 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 OPN3Q9H1Y3 402 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 GLIPR2Q9H4G4 154 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 IKZF5Q9H5V7 419 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 RCOR3Q9P2K3 495 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 PIGLQ9Y2B2 252 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 MEMO1Q9Y316 297 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 OARD1Q9Y530 152 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 TIMM10BQ9Y5J6 103 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 CLSPNQ9HAW4 1339 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 HELTA6NFD8 242 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 PP2D1A8MPX8 630 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 RHBDL1O75783 438 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 IGHG4P01861 327 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 POU2F1P14859 743 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 GDI1P31150 447 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 UGT1A5P35504 534 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 MAGEA8P43361 318 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ATP12AP54707 1039 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 BEX3Q00994 111 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 IL18R1Q13478 541 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SLC15A2Q16348 729 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 KCTD21Q4G0X4 260 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZNF57Q68EA5 555 aaPredicted RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 TRPM8Q7Z2W7 1104 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 MOB3BQ86TA1 216 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SLC22A9Q8IVM8 553 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 UBQLNLQ8IYU4 475 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 FGFRL1Q8N441 504 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 C17orf47Q8NEP4 570 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 OR5L2Q8NGL0 311 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 MIPOL1Q8TD10 442 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 AENQ8WTP8 325 aaKnown RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 FBXO32Q969P5 355 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SDSLQ96GA7 329 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 TMEM80Q96HE8 168 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 CNOT6LQ96LI5 555 aaKnown RBP2.05□□□□□ -2.08
CHD9-209ENST00000564255 CITED1Q99966 193 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ZBP1Q9H171 429 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SCRT2Q9NQ03 307 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 ADAM28Q9UKQ2 775 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SCML2Q9UQR0 700 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 L3MBTL1Q9Y468 752 aa2.05□□□□□ -2.08
CHD9-209ENST00000564255 SAGE2PA6NJ88 616 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 H7C423 109 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SGK1O00141 431 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 IGKV3-20P01619 116 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 H2AFZP0C0S5 128 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 PNMTP11086 282 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CD80P33681 288 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ATP5IP56385 69 aaPredicted RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 CUL2Q13617 745 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 TMEM44Q2T9K0 475 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 BEND3Q5T5X7 828 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 MEDAGQ5VYS4 303 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 OR4F3Q6IEY1 312 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 OR8G2PQ6IF36 304 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 ADAM5Q6NVV9 412 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 REG3GQ6UW15 175 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 APTXQ7Z2E3 356 aaKnown RBP2.04□□□□□ -2.08
CHD9-209ENST00000564255 ZNF329Q86UD4 541 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 SERPINA9Q86WD7 417 aa2.04□□□□□ -2.08
CHD9-209ENST00000564255 CDR2LQ86X02 465 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms