RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 FBXW5Q969U6 566 aa14.28□□□□□ -0.12
RNF40-205ENST00000563909 MAELQ96JY0 434 aaKnown RBP14.28□□□□□ -0.12
RNF40-205ENST00000563909 METTL7AQ9H8H3 244 aa14.28□□□□□ -0.12
RNF40-205ENST00000563909 NOP53Q9NZM5 478 aaKnown RBP14.28□□□□□ -0.12
RNF40-205ENST00000563909 GIMAP2Q9UG22 337 aa14.28□□□□□ -0.12
RNF40-205ENST00000563909 GLOD5A6NK44 160 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 ZNF195O14628 629 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 PGRMC2O15173 223 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 CLPSP04118 112 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 VIMP08670 466 aaKnown RBP14.27□□□□□ -0.13
RNF40-205ENST00000563909 BCKDHAP12694 445 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 PCSK2P16519 638 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 ZNF16P17020 682 aaPredicted RBP14.27□□□□□ -0.13
RNF40-205ENST00000563909 SDC1P18827 310 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 DPP4P27487 766 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 PIK3R1P27986 724 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 ALDH9A1P49189 494 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 TMED10P49755 219 aaKnown RBP14.27□□□□□ -0.13
RNF40-205ENST00000563909 LOXL1Q08397 574 aaPredicted RBP14.27□□□□□ -0.13
RNF40-205ENST00000563909 FAM120AOSQ5T036 256 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 FAM71E1Q6IPT2 247 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 OGFOD2Q6N063 350 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 ALKBH2Q6NS38 261 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 SLC48A1Q6P1K1 146 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 AAGABQ6PD74 315 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 EPGNQ6UW88 154 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 SPATA19Q7Z5L4 167 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 OR4K14Q8NGD5 310 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 CDC26Q8NHZ8 85 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF40-205ENST00000563909 ACTRT2Q8TDY3 377 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 TP53INP1Q96A56 240 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 SIKE1Q9BRV8 207 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 C1orf50Q9BV19 199 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 OR2B2Q9GZK3 357 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 WDR55Q9H6Y2 383 aaPredicted RBP14.27□□□□□ -0.13
RNF40-205ENST00000563909 ASIC5Q9NY37 505 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 TAS2R10Q9NYW0 307 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 EHD3Q9NZN3 535 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
RNF40-205ENST00000563909 GOLGA8QA0A0J9YX86 632 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 GOLGA8OA6NCC3 632 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 WASHC1A8K0Z3 465 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 GOLGA8NF8WBI6 632 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 ABCB7O75027 752 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 CBR3O75828 277 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 ZNF708P17019 499 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 DDX5P17844 614 aaKnown RBP14.26□□□□□ -0.13
RNF40-205ENST00000563909 DDCP20711 480 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 EPHA3P29320 983 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 SLC9B1Q4ZJI4 515 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 PDLIM3Q53GG5 364 aaPredicted RBP14.26□□□□□ -0.13
RNF40-205ENST00000563909 HLA-DQA1Q5Y7H0 255 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 NXNQ6DKJ4 435 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 MAVSQ7Z434 540 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 PRR22Q8IZ63 422 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 SAMD14Q8IZD0 417 aaPredicted RBP14.26□□□□□ -0.13
RNF40-205ENST00000563909 FAM9CQ8IZT9 166 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 CEP70Q8NHQ1 597 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 TSSK3Q96PN8 268 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 MIEF1Q9NQG6 463 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 BAIAP2L1Q9UHR4 511 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 CES1P1Q9UKY3 287 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 RNF115Q9Y4L5 304 aa14.26□□□□□ -0.13
RNF40-205ENST00000563909 A0A1W2PP18 115 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 CLOCKO15516 846 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 ERAL1O75616 437 aaKnown RBP14.25□□□□□ -0.13
RNF40-205ENST00000563909 TROVE2P10155 538 aaKnown RBP eCLIP14.25□□□□□ -0.13
RNF40-205ENST00000563909 IGFBP5P24593 272 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 SSTR4P31391 388 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 RPL3P39023 403 aaKnown RBP14.25□□□□□ -0.13
RNF40-205ENST00000563909 XKP51811 444 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 AQP5P55064 265 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 NRG3P56975 720 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 R3HCC1LQ7Z5L2 792 aaKnown RBP14.25□□□□□ -0.13
RNF40-205ENST00000563909 OR10H5Q8NGA6 315 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 SGMS2Q8NHU3 365 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 FIG4Q92562 907 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 NEUROG1Q92886 237 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 KLHL29Q96CT2 875 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 MTERF3Q96E29 417 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 C1orf159Q96HA4 380 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 EGLN2Q96KS0 407 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 SFXN2Q96NB2 322 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 CCDC28BQ9BUN5 200 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 REEP4Q9H6H4 257 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 CHODLQ9H9P2 273 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 GALNT9Q9HCQ5 603 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 GIMAP4Q9NUV9 329 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 FAM53CQ9NYF3 392 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 UTS2RQ9UKP6 389 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 EXO1Q9UQ84 846 aaKnown RBP14.25□□□□□ -0.13
RNF40-205ENST00000563909 ZNF780BQ9Y6R6 833 aa14.25□□□□□ -0.13
RNF40-205ENST00000563909 FREM1Q5H8C1 2179 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 DYSFO75923 2080 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 POLR3GO15318 223 aaPredicted RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 TBX19O60806 448 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 ICOSLGO75144 302 aa14.24□□□□□ -0.13
RNF40-205ENST00000563909 ABCB1P08183 1280 aaPredicted RBP14.24□□□□□ -0.13
RNF40-205ENST00000563909 SLC35E2P0CK97 266 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms