RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SENP5Q96HI0 755 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ATF6BQ99941 703 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 MED18Q9BUE0 208 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 OR52D1Q9H346 318 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 TNFRSF10DQ9UBN6 386 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 ZNF232Q9UNY5 417 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 GRIP1Q9Y3R0 1128 aa9.34□□□□□ -0.91
LRRC28-216ENST00000559819 SIRT4Q9Y6E7 314 aaPredicted RBP9.34□□□□□ -0.91
LRRC28-216ENST00000559819 GXYLT2A0PJZ3 443 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 A6NL46 340 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TTC36A6NLP5 189 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PLA2G10O15496 165 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 IGHA1P01876 353 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 KRT8P05787 483 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 CT62P0C5K7 136 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 IFI30P13284 250 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 LAMP2P13473 410 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TCEA1P23193 301 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TNFRSF4P43489 277 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 KIAA1024LP59773 190 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SHC2P98077 582 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SRSF5Q13243 272 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 OR1Q1Q15612 314 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 FHL5Q5TD97 284 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF322Q6U7Q0 402 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 UBE2Q1Q7Z7E8 422 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZAR1Q86SH2 424 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF761Q86XN6 746 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SIPA1Q96FS4 1042 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 WDR92Q96MX6 357 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 GABRG3Q99928 467 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 RNF32Q9H0A6 362 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 CACYBPQ9HB71 228 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 DZANK1Q9NVP4 752 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ACTR10Q9NZ32 417 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 H2AFY2Q9P0M6 372 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NTMQ9P121 344 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PHF11Q9UIL8 331 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF223Q9UK11 482 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SLC22A7Q9Y694 548 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 C12orf71A8MTZ7 269 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 H0YGG7 62 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 LYPD3O95274 346 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 CTSBP07858 339 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 FGF9P31371 208 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ARF3P61204 181 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PLAURQ03405 335 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ASAH1Q13510 395 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 BCL2A1Q16548 175 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TBRG1Q3YBR2 411 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 EOGTQ5NDL2 527 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PPP2R2DQ66LE6 453 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SDE2Q6IQ49 451 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 THSD4Q6ZMP0 1018 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TMEM91Q6ZNR0 172 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF619Q8N2I2 560 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 DNAJC5GQ8N7S2 189 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 DTX3Q8N9I9 347 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 OR13C2Q8NGS9 318 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NEIL3Q8TAT5 605 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 GRHL3Q8TE85 626 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 FAM3CQ92520 227 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ST6GAL2Q96JF0 529 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 ZNF350Q9GZX5 532 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SLC22A4Q9H015 551 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PIGUQ9H490 435 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 B3GAT2Q9NPZ5 323 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NLGN3Q9NZ94 848 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 A0A0B4J293 547 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 A6NCN8 305 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 B4DXG7 233 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 AKAP8O43823 692 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 REM1O75628 298 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 MRPL3P09001 348 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TBXA2RP21731 343 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NDUFS1P28331 727 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 KIR2DL3P43628 341 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PPP1CAP62136 330 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 DUSP8Q13202 625 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 KLHL12Q53G59 568 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 DGAT2L6Q6ZPD8 337 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 RANBP3LQ86VV4 465 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 COX18Q8N8Q8 333 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 AP3S1Q92572 193 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 RNF31Q96EP0 1072 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TEX12Q9BXU0 123 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 BEX2Q9BXY8 128 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 TCEAL2Q9H3H9 227 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 SIDT1Q9NXL6 827 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 CLDND1Q9NY35 253 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NPAP1Q9NZP6 1156 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PTGFRNQ9P2B2 879 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 NUFIP1Q9UHK0 495 aaKnown RBP9.33□□□□□ -0.92
LRRC28-216ENST00000559819 PILRAQ9UKJ1 303 aa9.33□□□□□ -0.92
LRRC28-216ENST00000559819 C19orf53Q9UNZ5 99 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms