RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TMEM53Q6P2H8 277 aa16.23■□□□□ 0.19
PTPN21-208ENST00000556564 HOXB13Q92826 284 aaPredicted RBP16.23■□□□□ 0.19
PTPN21-208ENST00000556564 ENKD1Q9H0I2 346 aa16.23■□□□□ 0.19
PTPN21-208ENST00000556564 C5orf51A6NDU8 294 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ARNTP27540 789 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ANKDD1AQ495B1 522 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ULK3Q6PHR2 472 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM207Q6UWW9 146 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ABHD12BQ7Z5M8 362 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 OR8J1Q8NGP2 316 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 PARPBPQ9NWS1 579 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 WASF3Q9UPY6 502 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 CDH10Q9Y6N8 788 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 CNR2P34972 360 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 CCL7P80098 99 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF829Q3KNS6 432 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 MRPL2Q5T653 305 aaKnown RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF432O94892 652 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 MAS1P04201 325 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 HNRNPA0Q13151 305 aaKnown RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 FTMTQ8N4E7 242 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 SIRT6Q8N6T7 355 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ATG5Q9H1Y0 275 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ACSS1Q9NUB1 689 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 SLC23A2Q9UGH3 650 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 TBC1D24Q9ULP9 559 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ADAP00813 363 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 STSP08842 583 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 SLC19A1P41440 591 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 NOVA1P51513 510 aaKnown RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF773Q6PK81 442 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 SLC35F2Q8IXU6 374 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 FRS2Q8WU20 508 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 S100A16Q96FQ6 103 aaKnown RBP16.22■□□□□ 0.19
PTPN21-208ENST00000556564 RDH12Q96NR8 316 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 EMC3Q9P0I2 261 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 WDR37Q9Y2I8 494 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
PTPN21-208ENST00000556564 A6NIZ1 184 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SUSD5O60279 629 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 UTS2O95399 124 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 DDAH2O95865 285 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SCGB1D2O95969 90 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 OSMP13725 252 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 RAP1BP61224 184 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 RAP1AP62834 184 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM176BQ3YBM2 270 aaPredicted RBP16.21■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF367Q7RTV3 350 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SPTSSAQ969W0 71 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 KCNS2Q9ULS6 477 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 H0YAE9 185 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 CFL1P23528 166 aaKnown RBP16.21■□□□□ 0.19
PTPN21-208ENST00000556564 CBLBQ13191 982 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 ATG4BQ9Y4P1 393 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 RAD1O60671 282 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 FAM189A2Q15884 450 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 MED25Q71SY5 747 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SPRED2Q7Z698 418 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 HPS1Q92902 700 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 ZMYND19Q96E35 227 aaPredicted RBP16.21■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF160Q9HCG1 818 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM181Q9P2C4 612 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM221A6NGB7 291 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 J3KTA2 159 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 M0R296 226 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 GCH1P30793 250 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 FASLGP48023 281 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 GARNL3Q5VVW2 1013 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 TOMM5Q8N4H5 51 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 L3MBTL4Q8NA19 623 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 HAVCR1Q96D42 359 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SMOC1Q9H4F8 434 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 INIPQ9NRY2 104 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF701Q9NV72 531 aaPredicted RBP16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SDK1Q7Z5N4 2213 aa16.21■□□□□ 0.19
PTPN21-208ENST00000556564 SELPLGQ14242 412 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 ARHGAP22Q7Z5H3 698 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 SLITRK4Q8IW52 837 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 MMP21Q8N119 569 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 LCORQ96JN0 433 aaPredicted RBP16.21■□□□□ 0.18
PTPN21-208ENST00000556564 GPR83Q9NYM4 423 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 CMAHPQ9Y471 501 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 CSNK1G3Q9Y6M4 447 aa16.21■□□□□ 0.18
PTPN21-208ENST00000556564 PHYHO14832 338 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 ZNF264O43296 627 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 ZBED5Q49AG3 693 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 NKAIN1Q4KMZ8 207 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 ABHD17CQ6PCB6 329 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 TECPR1Q7Z6L1 1165 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 DTX3Q8N9I9 347 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 BPIFA2Q96DR5 249 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 PRRC1Q96M27 445 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 LYSMD1Q96S90 227 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 LMF2Q9BU23 707 aaKnown RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 FBXO9Q9UK97 447 aaPredicted RBP16.2■□□□□ 0.18
PTPN21-208ENST00000556564 MMACHCQ9Y4U1 282 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 KIAA1217Q5T5P2 1943 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 DOCK5Q9H7D0 1870 aa16.2■□□□□ 0.18
PTPN21-208ENST00000556564 TEX13CA0A0J9YWL9 993 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms