RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 BOKQ9UMX3 212 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF443Q9Y2A4 671 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-209ENST00000553949 GPC6Q9Y625 555 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-209ENST00000553949 PIEZO2Q9H5I5 2752 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 IGLV3-32A0A0A0MS00 114 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 LRRC3CA6NJW4 275 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 CLDN24A6NM45 220 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 M0QX08 132 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 CXCR6O00574 342 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 GNB5O14775 395 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 SNPHO15079 494 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 GSTA4O15217 222 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 SORBS2O94875 1100 aaKnown RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 GLSO94925 669 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 PABPC4LP0CB38 370 aaKnown RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 NID1P14543 1247 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 IL7RP16871 459 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 TCN1P20061 433 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ELAVL4P26378 380 aaKnown RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 HTR1EP28566 365 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ADH7P40394 386 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 RFC3P40938 356 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 NCALDP61601 193 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 KCNJ10P78508 379 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 PMP22Q01453 160 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 LARS2Q15031 903 aaKnown RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 FXNQ16595 210 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 LIN52Q52LA3 116 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF311Q5JNZ3 666 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 OR5M10Q6IEU7 315 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF836Q6ZNA1 936 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 EIF3MQ7L2H7 374 aaKnown RBP11.17□□□□□ -0.62
SHMT2-209ENST00000553949 VRK2Q86Y07 508 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 PLCZ1Q86YW0 608 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ARMC8Q8IUR7 673 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 CMIPQ8IY22 773 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 FIG4Q92562 907 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 TAMM41Q96BW9 452 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 GNRHR2Q96P88 292 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 TAAR6Q96RI8 345 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 THTPAQ9BU02 230 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 SPATA5L1Q9BVQ7 753 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 TTTY12Q9BZ98 90 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 HHATLQ9HCP6 504 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF232Q9UNY5 417 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 SLC35A3Q9Y2D2 325 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 IFT52Q9Y366 437 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 HRH3Q9Y5N1 445 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 CNTRLQ7Z7A1 2325 aa11.17□□□□□ -0.62
SHMT2-209ENST00000553949 B4DXG7 233 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 GTPBP1O00178 669 aaKnown RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 GSC2O15499 205 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 OIP5O43482 229 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 HCRTR2O43614 444 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 BCAS1O75363 584 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 DNAJC8O75937 253 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 PDE5AO76074 875 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 MFN2O95140 757 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CSTAP01040 98 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 UBL4AP11441 157 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 NCK1P16333 377 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 GGT1P19440 569 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 PRKAR1BP31321 381 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 KDELR2P33947 212 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 MSX2P35548 267 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 PGM1P36871 562 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CRYBA2P53672 197 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 PLGLB1Q02325 96 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 DMTNQ08495 405 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 NFATC3Q12968 1075 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 HYAL4Q2M3T9 481 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 MRPL2Q5T653 305 aaKnown RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 RNF220Q5VTB9 566 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 FAM71CQ8NEG0 241 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 OR2M3Q8NG83 312 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 OR1J4Q8NGS1 313 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 SH3YL1Q96HL8 342 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CLPTM1LQ96KA5 538 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 BBC3Q96PG8 261 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 RSPO3Q9BXY4 272 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CADM1Q9BY67 442 aaKnown RBP11.16□□□□□ -0.62
SHMT2-209ENST00000553949 LRMDAQ9H2I8 198 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 RLIMQ9NVW2 624 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 MED11Q9P086 117 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 SEC14L3Q9UDX4 400 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 EGFL7Q9UHF1 273 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 FBXL2Q9UKC9 423 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CARD8Q9Y2G2 431 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 C15orf41Q9Y2V0 281 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CHST2Q9Y4C5 530 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 EXPH5Q8NEV8 1989 aa11.16□□□□□ -0.62
SHMT2-209ENST00000553949 CDHR4A6H8M9 788 aa11.15□□□□□ -0.62
SHMT2-209ENST00000553949 FAM166BA8MTA8 275 aa11.15□□□□□ -0.62
SHMT2-209ENST00000553949 ZNF264O43296 627 aa11.15□□□□□ -0.62
SHMT2-209ENST00000553949 GMFGO60234 142 aa11.15□□□□□ -0.62
SHMT2-209ENST00000553949 TPST1O60507 370 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms