RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MSRB3Q8IXL7 192 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF619Q8N2I2 560 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DPP10Q8N608 796 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 GATSQ8NAP1 163 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DUSP19Q8WTR2 217 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 PHF10Q8WUB8 498 aaKnown RBP10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DSN1Q9H410 356 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SAR1AQ9NR31 198 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 TAS2R10Q9NYW0 307 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC25A37Q9NYZ2 338 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 MED11Q9P086 117 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 SH3BGRL2Q9UJC5 107 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 CORO2BQ9UQ03 480 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 MEMO1Q9Y316 297 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 NDUFAF1Q9Y375 327 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 WDR45Q9Y484 360 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DTNAQ9Y4J8 743 aa10.64□□□□□ -0.71
TRAFD1-209ENST00000552896 DSPPQ9NZW4 1301 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PRAMEF27A3QJZ7 478 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 WIPF3A6NGB9 483 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 BBIP1A8MTZ0 92 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CLIC1O00299 241 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CCL21O00585 134 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 FCMRO60667 390 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 H6PDO95479 791 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CHRM4P08173 479 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 SNRPB2P08579 225 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 BMP2P12643 396 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 ETFAP13804 333 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CD1EP15812 388 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF17P17021 662 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 RPS4Y1P22090 263 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CHMP24386 653 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CRATP43155 626 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 GFRA1P56159 465 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF117Q03924 483 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 RGNQ15493 299 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 MAPRE2Q15555 327 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 GPR68Q15743 365 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 GPAT3Q53EU6 434 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 COQ5Q5HYK3 327 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PDZK1Q5T2W1 519 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 VASNQ6EMK4 673 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 AAGABQ6PD74 315 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 RPTNQ6XPR3 784 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 LRRC74BQ6ZQY2 392 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 DHDDSQ86SQ9 333 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 YRDCQ86U90 279 aaKnown RBP10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PM20D2Q8IYS1 436 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF614Q8N883 585 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 TOR1AIP2Q8NFQ8 470 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PHOSPHO1Q8TCT1 267 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PMM1Q92871 262 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CCDC120Q96HB5 630 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 DMRTA2Q96SC8 542 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CPPED1Q9BRF8 314 aaPredicted RBP10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 UGT2B28Q9BY64 529 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PRDM14Q9GZV8 571 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC38A1Q9H2H9 487 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 PNPLA3Q9NST1 481 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CALML5Q9NZT1 146 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 VAPAQ9P0L0 249 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 KCNE5Q9UJ90 142 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 ACAD8Q9UKU7 415 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 MKLN1Q9UL63 735 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 SLC6A5Q9Y345 797 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 L3MBTL1Q9Y468 752 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 CAPN7Q9Y6W3 813 aa10.63□□□□□ -0.71
TRAFD1-209ENST00000552896 HECTD1Q9ULT8 2610 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 HCFC1P51610 2035 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 A0A087WZY1 265 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 CENPVL1A0A0U1RR11 272 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 C7orf72A4D263 438 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 TMEM247A6NEH6 219 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SERINC4A6NH21 518 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 LINC01387J3KSC0 135 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 HCRTR2O43614 444 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ZIC3O60481 467 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 UGT2B17O75795 530 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 HOXD4P09016 255 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 NR2F1P10589 423 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 UBL4AP11441 157 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ESRRAP11474 423 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GABRA1P14867 456 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 BMP7P18075 431 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 HK1P19367 917 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 DRD4P21917 467 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ACVR2AP27037 513 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 PTGER4P35408 488 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ADH7P40394 386 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 ZNF41P51814 821 aaPredicted RBP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SEC24CP53992 1094 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 CRISP3P54108 245 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GYS2P54840 703 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 B3GALT5-AS1P59052 145 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 GNGT1P63211 74 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SF3A3Q12874 501 aaKnown RBP eCLIP10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 KLF10Q13118 480 aa10.62□□□□□ -0.71
TRAFD1-209ENST00000552896 SKP2Q13309 424 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms