RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OR5M10Q6IEU7 315 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 EID3Q8N140 333 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 PCYOX1LQ8NBM8 494 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 TOR1AIP2Q8NFQ8 470 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 C1GALT1C1Q96EU7 318 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 CCT8L2Q96SF2 557 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 SH3GL1Q99961 368 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 TMEM38AQ9H6F2 299 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 TAS2R10Q9NYW0 307 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 ICAM5Q9UMF0 924 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 ARL2BPQ9Y2Y0 163 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 NINQ8N4C6 2090 aa13.15□□□□□ -0.3
DDX54-203ENST00000546869 LOC100653049A0A140TA62 436 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 C7orf72A4D263 438 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 KRT34O76011 436 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 FAM107AO95990 144 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 CHRM4P08173 479 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 HOXD4P09016 255 aaPredicted RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 RPS4Y1P22090 263 aaKnown RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 PRDX6P30041 224 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 GCKP35557 465 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 P2RX1P51575 399 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 FGFBP1Q14512 234 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 MAPK14Q16539 360 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 ZSWIM7Q19AV6 140 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 MMEL1Q495T6 779 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 GXYLT1Q4G148 440 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 EIPR1Q53HC9 387 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 WIPI1Q5MNZ9 446 aaPredicted RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 EIF3MQ7L2H7 374 aaKnown RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 SNX32Q86XE0 403 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 DOLPP1Q86YN1 238 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 OR14L1PQ8NHC6 308 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 B4GALNT2Q8NHY0 566 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 PHOSPHO1Q8TCT1 267 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 LRRC58Q96CX6 371 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 ZG16BQ96DA0 208 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 TIMP4Q99727 224 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 CPPED1Q9BRF8 314 aaPredicted RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 SLC6A15Q9H2J7 730 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 IKZF5Q9H5V7 419 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 RUBCNLQ9H714 662 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 GID8Q9NWU2 228 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 ARMCX1Q9P291 453 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 SLC5A6Q9Y289 635 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 SLC35A3Q9Y2D2 325 aa13.14□□□□□ -0.31
DDX54-203ENST00000546869 FASNP49327 2511 aaKnown RBP13.14□□□□□ -0.31
DDX54-203ENST00000546869 MYO18BQ8IUG5 2567 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 WIPF3A6NGB9 483 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 C17orf51A8MQB3 221 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 GTPBP1O00178 669 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 ETV2O00321 342 aaPredicted RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 MRASO14807 208 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ZNF264O43296 627 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 DBIP07108 87 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ARAFP10398 606 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 COX4I1P13073 169 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 CPN1P15169 458 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 BMP7P18075 431 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 PTGER4P35408 488 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 KCNJ10P78508 379 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ZNF117Q03924 483 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 CRYZQ08257 329 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 RBBP4Q09028 425 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 TOMM20Q15388 145 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ADRM1Q16186 407 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 BCL2A1Q16548 175 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 C3AR1Q16581 482 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 EMC4Q5J8M3 183 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 REP15Q6BDI9 236 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 NANOGP8Q6NSW7 305 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 MTFR2Q6P444 385 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 AAGABQ6PD74 315 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 SERPINA11Q86U17 422 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 YRDCQ86U90 279 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 IFNEQ86WN2 208 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 FAM26EQ8N5C1 309 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 FAM71CQ8NEG0 241 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 ABTB1Q969K4 478 aaPredicted RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 ZBTB8AQ96BR9 441 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 CMTM5Q96DZ9 223 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 TREX2Q9BQ50 279 aaPredicted RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 PIGQQ9BRB3 760 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 THUMPD3Q9BV44 507 aaKnown RBP13.13□□□□□ -0.31
DDX54-203ENST00000546869 PRDM14Q9GZV8 571 aa13.13□□□□□ -0.31
DDX54-203ENST00000546869 TP63Q9H3D4 680 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms