RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 FCRL6Q6DN72 434 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 BMP8AQ7Z5Y6 402 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 CMIPQ8IY22 773 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 CELF2-AS1Q8N7Q2 184 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 MRPL38Q96DV4 380 aaKnown RBP11.58□□□□□ -0.56
PAAF1-215ENST00000544909 NEK6Q9HC98 313 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 RABL2AQ9UBK7 228 aaPredicted RBP11.58□□□□□ -0.56
PAAF1-215ENST00000544909 RABL2BQ9UNT1 228 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 MED31Q9Y3C7 131 aa11.58□□□□□ -0.56
PAAF1-215ENST00000544909 MEIOCA2RUB1 952 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 PRR23AA6NEV1 266 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 CDC42EP2O14613 210 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 FRS3O43559 492 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 PLPP2O43688 288 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 GALR3O60755 368 aaPredicted RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 LYPD3O95274 346 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 CD1AP06126 327 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SLC35E2P0CK97 266 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 CELP19835 753 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TBXA2RP21731 343 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 DRD5P21918 477 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 MAT2AP31153 395 aaKnown RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SOX18P35713 384 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 RABIFP47224 123 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 PSMD4P55036 377 aaKnown RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SRP54P61011 504 aaKnown RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 POU6F2P78424 691 aaPredicted RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 MXD1Q05195 221 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 OR1Q1Q15612 314 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 PRICKLE4Q2TBC4 344 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 AMZ1Q400G9 498 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SMARCD3Q6STE5 483 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 PAMR1Q6UXH9 720 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TRIM48Q8IWZ4 208 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 C7orf61Q8IZ16 206 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 LSMEM1Q8N8F7 131 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TEX19Q8NA77 164 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 AVL9Q8NBF6 648 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SIMC1Q8NDZ2 872 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 ATP6V1C2Q8NEY4 427 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 FAM174AQ8TBP5 190 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 GPBAR1Q8TDU6 330 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TMEM203Q969S6 136 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 BMFQ96LC9 184 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 ZNF578Q96N58 590 aaPredicted RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 FRMD6Q96NE9 622 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 KCNJ15Q99712 375 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TM9SF2Q99805 663 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TTYH2Q9BSA4 534 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TRIM2Q9C040 744 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 TMEM27Q9HBJ8 222 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 RBFOX1Q9NWB1 397 aaKnown RBP11.57□□□□□ -0.56
PAAF1-215ENST00000544909 SIGLEC7Q9Y286 467 aa11.57□□□□□ -0.56
PAAF1-215ENST00000544909 GTPBP1O00178 669 aaKnown RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 P2RX6O15547 441 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 IGF2P01344 180 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MT-ND5P03915 603 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 RAB38P57729 211 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 UBE2IP63279 158 aaKnown RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MAP4K2Q12851 820 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 FZD5Q13467 585 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 TCEA2Q15560 299 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 PRRT3Q5FWE3 981 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 TRIQKQ629K1 86 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 HBMQ6B0K9 141 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ARHGAP11AQ6P4F7 1023 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 CPOQ8IVL8 374 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 C19orf18Q8NEA5 215 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 OR4F15Q8NGB8 312 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 COL26A1Q96A83 441 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 BPIFA2Q96DR5 249 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 SAMD8Q96LT4 415 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ATF6BQ99941 703 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 NDC1Q9BTX1 674 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 LMF2Q9BU23 707 aaKnown RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 GSDMCQ9BYG8 508 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 C8orf33Q9H7E9 229 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 RNF121Q9H920 327 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 MAT2BQ9NZL9 334 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 KLHL21Q9UJP4 597 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 DOCK9Q9BZ29 2069 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 A0A0B4J2E0 115 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 A0A1B0GTQ1 180 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 A0A1B0GX12 115 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 RIIAD1A6NNX1 92 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 H0YGG7 62 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 RNF13O43567 381 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 KLF8O95600 359 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 EML2O95834 649 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 IFNGP01579 166 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 STATHP02808 62 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ZGLP1P0C6A0 271 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 PRKAR1AP10644 381 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 SLC2A2P11168 524 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 ZNF3P17036 446 aa11.56□□□□□ -0.56
PAAF1-215ENST00000544909 AK4P27144 223 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-215ENST00000544909 SEC13P55735 322 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms