RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 H3BTX0 84 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 PDHXO00330 501 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 TOXO94900 526 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 PRAMEF12O95522 483 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 IGSF6O95976 241 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 SLC35G4P0C7Q5 338 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 UBTFL1P0CB47 393 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-207ENST00000544052 TNNI3P19429 210 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 DRD5P21918 477 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
SCFD1-207ENST00000544052 PAX7P23759 505 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 VCPP55072 806 aaKnown RBP3.03□□□□□ -1.92
SCFD1-207ENST00000544052 SRPXP78539 464 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 ZP4Q12836 540 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 CDKN3Q16667 212 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 CAVIN4Q5BKX8 364 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 SEL1L2Q5TEA6 688 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 NIPAL3Q6P499 406 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 REG3GQ6UW15 175 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 ATRAIDQ6UW56 229 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 EFCAB13Q8IY85 973 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 CCDC36Q8IYA8 594 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 PRSS33Q8NF86 280 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MIPOL1Q8TD10 442 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 DLX4Q92988 240 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-207ENST00000544052 ADIPOR1Q96A54 375 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MOCOSQ96EN8 888 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 VSTM2LQ96N03 204 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 HSD17B14Q9BPX1 270 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 RNF41Q9H4P4 317 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-207ENST00000544052 WDR76Q9H967 626 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 ESM1Q9NQ30 184 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 AGPAT5Q9NUQ2 364 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MBD2Q9UBB5 411 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 SEC14L4Q9UDX3 406 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MGAT4AQ9UM21 535 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 B9D1Q9UPM9 204 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 AUP1Q9Y679 476 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 MROH7-TTC4A0A0A0MT08 1334 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 CDH23Q9H251 3354 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 ZNF236Q9UL36 1845 aa3.03□□□□□ -1.92
SCFD1-207ENST00000544052 GBF1Q92538 1859 aa3.03□□□□□ -1.93
SCFD1-207ENST00000544052 LRRC37A2A6NM11 1700 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ZSCAN5CA6NGD5 496 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 RPL37AP8A6NKH3 93 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 A8MXK9 166 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ALOX15BO15296 676 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 HMMRO75330 724 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 IGHG1P01857 330 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 THRBP10828 461 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CLUP10909 449 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 BTDP43251 543 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 MECOMQ03112 1051 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 SNTB2Q13425 540 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 TFDP1Q14186 410 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CD226Q15762 336 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ANKRD55Q3KP44 614 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 NADK2Q4G0N4 442 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 AGAP7PQ5VUJ5 663 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 NCR3LG1Q68D85 454 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CBLN3Q6UW01 205 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 LCA5Q86VQ0 697 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 OR10T2Q8NGX3 314 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 VPS35Q96QK1 796 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 IWS1Q96ST2 819 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CABLES2Q9BTV7 478 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 TBCDQ9BTW9 1192 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 TMEM117Q9H0C3 514 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PRO3102Q9H379 93 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.02□□□□□ -1.935e-6■■■■□ 22.2
SCFD1-207ENST00000544052 RCOR3Q9P2K3 495 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 GHRLQ9UBU3 117 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PURGQ9UJV8 347 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 LRIT2A6NDA9 550 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ASB14A6NK59 587 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 RNF212BA8MTL3 300 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 EPM2AB3EWF7 344 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PRR23D1E9PI22 279 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 NTN3O00634 580 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ANGPT2O15123 496 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 MAPK13O15264 365 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PDE5AO76074 875 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 SEMA4FO95754 770 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ASNSP08243 561 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 FCGR3AP08637 254 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PRR23D2P0DMB1 279 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 AXLP30530 894 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 SLC1A4P43007 532 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PGFP49763 221 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 IRX1P78414 480 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CNTN2Q02246 1040 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 CCL14Q16627 93 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF311Q5JNZ3 666 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 NET1Q7Z628 596 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 ZDHHC21Q8IVQ6 265 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 LRRC15Q8TF66 581 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 PINX1Q96BK5 328 aaKnown RBP3.02□□□□□ -1.93
SCFD1-207ENST00000544052 HPDLQ96IR7 371 aa3.02□□□□□ -1.93
SCFD1-207ENST00000544052 SLC45A3Q96JT2 553 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms