RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PPP1R36Q96LQ0 422 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PRPF18Q99633 342 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LIME1Q9H400 295 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PNPOQ9NVS9 261 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DNAJB12Q9NXW2 375 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ITGB1BP2Q9UKP3 347 aa11.8□□□□□ -0.52
TNFRSF1A-215ENST00000543359 HEATR5AQ86XA9 2040 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SLC22A20A6NK97 555 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EEF1E1-BLOC1S5C9J1V9 151 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 H3BML4 177 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EEF1E1O43324 174 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GMFGO60234 142 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CGAP01215 116 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LINGO3P0C6S8 592 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF17P17021 662 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PCYT1AP49585 367 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EEFSECP57772 596 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EEF1A1P68104 462 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MAD2L1Q13257 205 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CTU2Q2VPK5 515 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PLPPR5Q32ZL2 321 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EEF1A1P5Q5VTE0 462 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR4F3Q6IEY1 312 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LUZP2Q86TE4 346 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TMEM200AQ86VY9 491 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KIF18BQ86Y91 864 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLECL1Q8IZS7 167 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MEIOBQ8N635 442 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GATSQ8NAP1 163 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 FNDC9Q8TBE3 224 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 JADE3Q92613 823 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF524Q96C55 264 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RBM24Q9BX46 236 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CENPHQ9H3R5 247 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PIGMQ9H3S5 423 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RNF122Q9H9V4 155 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NEUROD4Q9HD90 331 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 KCNK9Q9NPC2 374 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MED17Q9NVC6 651 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 GALNT8Q9NY28 637 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 VDAC3Q9Y277 283 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF175Q9Y473 711 aa11.79□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NPIPA5A0A0B4J1W7 369 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TUBAL3A6NHL2 446 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NPIPA7E9PJI5 369 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MSTNO14793 375 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ADAMDEC1O15204 470 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SEC14L5O43304 696 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 EFNA2O43921 213 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SNNO75324 88 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 AQP8O94778 261 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SOX30O94993 753 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NPIPA8P0DM63 369 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 IL11P20809 199 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RPS26P62854 115 aaKnown RBP11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF117Q03924 483 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 STX3Q13277 289 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 TP53BP2Q13625 1128 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PGS1Q32NB8 556 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 DCST2Q5T1A1 773 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 AP1ARQ63HQ0 302 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 VWA1Q6PCB0 445 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CBLN3Q6UW01 205 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 C6orf120Q7Z4R8 191 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 BTLAQ7Z6A9 289 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CROCCP2Q86T23 111 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MISPQ8IVT2 679 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 LRRC34Q8IZ02 419 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLEC4FQ8N1N0 589 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR5AK3PQ8NH89 298 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ADAMTS15Q8TE58 950 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MOAP1Q96BY2 351 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 SH3YL1Q96HL8 342 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 OR7D2Q96RA2 312 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 PINK1Q9BXM7 581 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 NUF2Q9BZD4 464 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 CLEC4MQ9H2X3 399 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 MEAF6Q9HAF1 191 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 HHATLQ9HCP6 504 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 ROS1P08922 2347 aa11.78□□□□□ -0.52
TNFRSF1A-215ENST00000543359 RNASET2O00584 256 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SCDO00767 359 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SDHDO14521 159 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ALDOCP09972 364 aaKnown RBP11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 NID1P14543 1247 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SLC6A8P48029 635 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 RNF144AP50876 292 aaPredicted RBP11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SLC18A1P54219 525 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 ATP12AP54707 1039 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 PON3Q15166 354 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 SPDYE7PQ495Y7 208 aa11.77□□□□□ -0.53
TNFRSF1A-215ENST00000543359 BEND6Q5SZJ8 279 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms