RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 MARS2Q96GW9 593 aaKnown RBP11.8□□□□□ -0.52
DDX55-206ENST00000539934 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 NUAK2Q9H093 628 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 REEP4Q9H6H4 257 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 ALG9Q9H6U8 611 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 TCF7L1Q9HCS4 588 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 POT1Q9NUX5 634 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 AASSQ9UDR5 926 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 MAB21L2Q9Y586 359 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 SCN8AQ9UQD0 1980 aa11.8□□□□□ -0.52
DDX55-206ENST00000539934 A0A087X0M5 115 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 A0A1B0GX30 115 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 PRR23D1E9PI22 279 aaPredicted RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 K7ESF4 209 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 OIP5O43482 229 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 CRYGCP07315 174 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 PRR23D2P0DMB1 279 aaPredicted RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 DAOP14920 347 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 RPS3P23396 243 aaKnown RBP eCLIP11.79□□□□□ -0.52
DDX55-206ENST00000539934 MPSTP25325 297 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 FHITP49789 147 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ZNF155Q12901 538 aaPredicted RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 ZNF239Q16600 458 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 PTPRNQ16849 979 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SOWAHCQ53LP3 525 aaPredicted RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 MAVSQ7Z434 540 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SYVN1Q86TM6 617 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 PIANPQ8IYJ0 282 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 NAT16Q8N8M0 369 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 TMEM104Q8NE00 496 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 BVESQ8NE79 360 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 CYGBQ8WWM9 190 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 MUL1Q969V5 352 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ISG20Q96AZ6 181 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 ECHDC3Q96DC8 303 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 RSPRY1Q96DX4 576 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ABHD17AQ96GS6 310 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SLC6A16Q9GZN6 736 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 EVA1AQ9H8M9 152 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 KRT84Q9NSB2 600 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 GTSE1Q9NYZ3 720 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 TRAPPC4Q9Y296 219 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SLC5A10A0PJK1 596 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 A8MT66 165 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 GTPBP1O00178 669 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 MAN2B1O00754 1011 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 CD1DP15813 335 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ME2P23368 584 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 RPL10P27635 214 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 HTR1BP28222 390 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 S100A11P31949 105 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 POLR2IP36954 125 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 MAP2K4P45985 399 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 IDH3AP50213 366 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 RPL14P50914 215 aaKnown RBP11.79□□□□□ -0.52
DDX55-206ENST00000539934 DNAJB13P59910 316 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
DDX55-206ENST00000539934 CACNG1Q06432 222 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ARHGEF7Q14155 803 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 IRF3Q14653 427 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 VHLLQ6RSH7 139 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 GPR137CQ8N3F9 429 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 BEND2Q8NDZ0 799 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 OR5D18Q8NGL1 313 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 CHTF18Q8WVB6 975 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 PHF21BQ96EK2 531 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 INTS14Q96SY0 518 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SPSB2Q99619 263 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 P2RY13Q9BPV8 354 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ALOXE3Q9BYJ1 711 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ZDHHC6Q9H6R6 413 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ADAP2Q9NPF8 381 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 SOHLH2Q9NX45 425 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 OSGIN1Q9UJX0 560 aa11.79□□□□□ -0.52
DDX55-206ENST00000539934 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 LNP1A1A4G5 178 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 MKRN2OSH3BPM6 223 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZNF195O14628 629 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 LCMT2O60294 686 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 OR1I1O60431 355 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 VPS26AO75436 327 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 CLDN7O95471 211 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 SNRPB2P08579 225 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 TEAD1P28347 426 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 MAPK1P28482 360 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PTGER3P43115 390 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 CCR4P51679 360 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 TIAL1Q01085 375 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX55-206ENST00000539934 FOXC1Q12948 553 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 SERTAD2Q14140 314 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 GPR176Q14439 515 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 GUCA2BQ16661 112 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 CARD16Q5EG05 197 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 STPG1Q5TH74 334 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 SPESP1Q6UW49 350 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms