RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PSMA8Q8TAA3 256 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ADAMTS15Q8TE58 950 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 PGM2Q96G03 612 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 DUSP26Q9BV47 211 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 BHLHE41Q9C0J9 482 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 OPN3Q9H1Y3 402 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 RNF122Q9H9V4 155 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 MED17Q9NVC6 651 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 GPATCH2Q9NW75 528 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 NOP53Q9NZM5 478 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 FAF1Q9UNN5 650 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 ZNF175Q9Y473 711 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 MPDZO75970 2070 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 AKAP6Q13023 2319 aa17.15■□□□□ 0.34
TNFRSF1A-212ENST00000539372 A0A087WZY1 265 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MSTNO14793 375 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 BIRC5O15392 142 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 AQP8O94778 261 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF17P17021 662 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ATP6V1C1P21283 382 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 BGNP21810 368 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SOAT1P35610 550 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 EIF1AXP47813 144 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF41P51814 821 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FAM27E3Q08E93 113 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MAD2L1Q13257 205 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PLPPR5Q32ZL2 321 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MISPQ8IVT2 679 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 GTPBP8Q8N3Z3 284 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NATD1Q8N6N6 113 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 B4GALNT2Q8NHY0 566 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SFXN5Q8TD22 340 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NINJ1Q92982 152 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RNF145Q96MT1 663 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DACH2Q96NX9 599 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 TMEM185BQ9H7F4 350 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 AKTIPQ9H8T0 292 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HHATLQ9HCP6 504 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SSU72Q9NP77 194 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 KCNK9Q9NPC2 374 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
TNFRSF1A-212ENST00000539372 TM9SF1O15321 606 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SLC6A8P48029 635 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SLC1A6P48664 564 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CLDN8P56748 225 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RPS26P62854 115 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HBA1P69905 142 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MPP2Q14168 576 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DCST2Q5T1A1 773 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF474Q6S9Z5 364 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 WDR75Q8IWA0 830 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CLECL1Q8IZS7 167 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CLEC4FQ8N1N0 589 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR5D16Q8NGK9 328 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PHOSPHO1Q8TCT1 267 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ACTRT2Q8TDY3 377 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZBTB8AQ96BR9 441 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SORT1Q99523 831 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NEUROD4Q9HD90 331 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 STOML1Q9UBI4 398 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
TNFRSF1A-212ENST00000539372 A0A1W2PQD3 144 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OIP5O43482 229 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 KRT16P08779 473 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MYZAPP0CAP1 466 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DNASE1P24855 282 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PSMA4P25789 261 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 C21orf58P58505 322 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF117Q03924 483 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR4F3Q6IEY1 312 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 POC1BQ8TC44 478 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 MOAP1Q96BY2 351 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OR7D2Q96RA2 312 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FOXC2Q99958 501 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PAIP2Q9BPZ3 127 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PRRG4Q9BZD6 226 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ASIC5Q9NY37 505 aa17.12■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HRNRQ86YZ3 2850 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 C7orf72A4D263 438 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 TNFSF11O14788 317 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CGAP01215 116 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 HRGP04196 525 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 FCGR2AP12318 317 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 IL11P20809 199 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CD79BP40259 229 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 OCRLQ01968 901 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 SMU1Q2TAY7 513 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CTU2Q2VPK5 515 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 NDUFAF6Q330K2 333 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 KLHL26Q53HC5 615 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 TNFAIP8L3Q5GJ75 292 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.11■□□□□ 0.334e-6■■■□□ 16.5
TNFRSF1A-212ENST00000539372 CBLN3Q6UW01 205 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 PAMR1Q6UXH9 720 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 CAMKMTQ7Z624 323 aa17.11■□□□□ 0.33
TNFRSF1A-212ENST00000539372 ZNF614Q8N883 585 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms