RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 RNGTTO60942 597 aaKnown RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 MTRF1O75570 445 aaKnown RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZIC2O95409 532 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 HLA-DQB1P01920 261 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 NTSR1P30989 418 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 PDX1P52945 283 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF155Q12901 538 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 PYDC2Q56P42 97 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF362Q5T0B9 420 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 C6orf132Q5T0Z8 1188 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SLC30A6Q6NXT4 461 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 FRRS1Q6ZNA5 592 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF620Q6ZNG0 422 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 PAQR7Q86WK9 346 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 NRMQ8IXM6 262 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SYT14Q8NB59 555 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 RLN3Q8WXF3 142 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 KAT2AQ92830 837 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 MS4A4EQ96PG1 132 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 C1QTNF7Q9BXJ2 289 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SLC17A9Q9BYT1 436 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 C11orf54Q9H0W9 315 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 SYNPO2LQ9H987 977 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 CACYBPQ9HB71 228 aaKnown RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 OR6C2Q9NZP2 312 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 H2AFY2Q9P0M6 372 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 MOSPD1Q9UJG1 213 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 POLHQ9Y253 713 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF443Q9Y2A4 671 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-207ENST00000538862 CDH10Q9Y6N8 788 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 THADAQ6YHU6 1953 aa13.54□□□□□ -0.24
CDCA3-207ENST00000538862 A0A1W2PQF6 199 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 CENPXA8MT69 81 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 ISM1B1AKI9 464 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 FAM47E-STBD1D6RA91 191 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 THY1P04216 161 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 RCVRNP35243 200 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 DAB2P98082 770 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 RGS1Q08116 209 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 LTB4RQ15722 352 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 ARHGAP11BQ3KRB8 267 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 ZFP69Q49AA0 526 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 SLC7A5P1Q8MH63 180 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 LRRC25Q8N386 305 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-207ENST00000538862 FRMD1Q8N878 549 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 Q8N9G6 341 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-207ENST00000538862 OR4F15Q8NGB8 312 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 NT5CQ8TCD5 201 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 APOOQ9BUR5 198 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 SLC6A17Q9H1V8 727 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 MMP28Q9H239 520 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 FBXO9Q9UK97 447 aaPredicted RBP13.53□□□□□ -0.24
CDCA3-207ENST00000538862 PCDHGB7Q9Y5F8 929 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 LAMA1P25391 3075 aa13.53□□□□□ -0.24
CDCA3-207ENST00000538862 PLA2G10O15496 165 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CH25HO95992 272 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 LALBAP00709 142 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 NDUFV2P19404 249 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 NDUFS1P28331 727 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 IGFALSP35858 605 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CD79BP40259 229 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 BDH1Q02338 343 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CAMK2BQ13554 666 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 ZNF776Q68DI1 518 aaPredicted RBP13.52□□□□□ -0.24
CDCA3-207ENST00000538862 VN1R4Q7Z5H5 301 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 AMIGO1Q86WK6 493 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 SLC16A11Q8NCK7 471 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 OR7G2Q8NG99 324 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 GANCQ8TET4 914 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 PPP1R3EQ9H7J1 279 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 PRDM9Q9NQV7 894 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.24
CDCA3-207ENST00000538862 NCDNQ9UBB6 729 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 PHF11Q9UIL8 331 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CBLCQ9ULV8 474 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CEP250Q9BV73 2442 aa13.52□□□□□ -0.24
CDCA3-207ENST00000538862 CCDC163A0A0D9SF12 145 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 LINC00854A0A1B0GVQ3 168 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 A0A1W2PQU0 124 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 B4DXG7 233 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 GABRPO00591 440 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 TFECO14948 347 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 LRRTM2O43300 516 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 PLRG1O43660 514 aaKnown RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 NDUFB5O43674 189 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 NTN1O95631 604 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 MYL9P24844 172 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 GPR4P46093 362 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 EVX1P49640 407 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 RNF144AP50876 292 aaPredicted RBP13.52□□□□□ -0.25
CDCA3-207ENST00000538862 TNFRSF17Q02223 184 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 DUSP8Q13202 625 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 RIN1Q13671 783 aa13.52□□□□□ -0.25
CDCA3-207ENST00000538862 TBRG1Q3YBR2 411 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms