RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CXXC5Q7LFL8 322 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ABI3BPQ7Z7G0 1075 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FAM98AQ8NCA5 519 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 LMX1AQ8TE12 382 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ACOT11Q8WXI4 607 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 KCTD7Q96MP8 289 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 DCLRE1CQ96SD1 692 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF559Q9BR84 538 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 POLDIP3Q9BY77 421 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 OR52D1Q9H346 318 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ISG20L2Q9H9L3 353 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SLC25A19Q9HC21 320 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 HINT3Q9NQE9 182 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FKBP14Q9NWM8 211 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 B3GNT3Q9Y2A9 372 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TSC22D4Q9Y3Q8 395 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 PRODHO43272 600 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 CHST10O43529 356 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 STX11O75558 287 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 KCNK2O95069 426 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 PPP1R3DO95685 299 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 THY1P04216 161 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 CRYBB2P43320 205 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TSPAN31Q12999 210 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 IL18Q14116 193 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 IRF3Q14653 427 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 UBXN2BQ14CS0 331 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 IDNKQ5T6J7 187 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FAM27D1Q5T7N8 215 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FAAH2Q6GMR7 532 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 RPTNQ6XPR3 784 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 USP53Q70EK8 1073 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 GDPD3Q7L5L3 318 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ARL14Q8N4G2 192 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 OR2T33Q8NG76 320 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SPACA7Q96KW9 195 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 CD180Q99467 661 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 RPS6KB2Q9UBS0 482 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 KLK4Q9Y5K2 254 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 DAPL1A0PJW8 107 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CDC14CA4D256 554 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CCNKO75909 580 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MAKP20794 623 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 FOXL2P58012 376 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 POU6F2P78424 691 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 BNC1Q01954 994 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 KCNAB1Q14722 419 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 KIR2DS3Q14952 304 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 BAK1Q16611 211 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 DEFB133Q30KQ1 61 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 PRR22Q8IZ63 422 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 PROKR2Q8NFJ6 384 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 OR4K13Q8NH42 304 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 DIO2Q92813 273 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GAL3ST4Q96RP7 486 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MAP3K3Q99759 626 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 HCAR1Q9BXC0 346 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 PITHD1Q9GZP4 211 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 FN3KQ9H479 309 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CCDC86Q9H6F5 360 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 PNO1Q9NRX1 252 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GSTK1Q9Y2Q3 226 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZDBF2Q9HCK1 2354 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 RP1P56715 2156 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MED12Q93074 2177 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 C2CD4DB7Z1M9 353 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 AQP9O43315 295 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MRPS14O60783 128 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 HPGDP15428 266 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 FABP5Q01469 135 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF57Q68EA5 555 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MTFR2Q6P444 385 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 WDR88Q6ZMY6 472 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SHISA6Q6ZSJ9 500 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GLCCI1Q86VQ1 547 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SLC22A18ASQ8N1D0 253 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SFXN5Q8TD22 340 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZDHHC1Q8WTX9 485 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TMEM239Q8WW34 195 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 OSTF1Q92882 214 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 EFHD2Q96C19 240 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GIMAP5Q96F15 307 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SLC38A3Q99624 504 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 BCL7BQ9BQE9 202 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 UBQLN3Q9H347 655 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TMEM27Q9HBJ8 222 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 BCL2L10Q9HD36 194 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 DSPPQ9NZW4 1301 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 A0A1W2PQ09 198 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 UNC119BA6NIH7 251 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SLITRK5O94991 958 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms