RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 AKAP1Q92667 903 aaKnown RBP eCLIP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 INPP5DQ92835 1189 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ESAMQ96AP7 390 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SARAFQ96BY9 339 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CTHRC1Q96CG8 243 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LRRC45Q96CN5 670 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF501Q96CX3 271 aaPredicted RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CXorf40BQ96DE9 158 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DAZAP1Q96EP5 407 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRMT61AQ96FX7 289 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CERS2Q96G23 380 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZC3HAV1LQ96H79 300 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CNDP1Q96KN2 507 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TTC25Q96NG3 672 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF570Q96NI8 536 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF285Q96NJ3 590 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PPP1R2P1Q96PQ5 205 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FYTTD1Q96QD9 318 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR6C1Q96RD1 312 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC39A3Q9BRY0 314 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RAB33BQ9H082 229 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SPNS1Q9H2V7 528 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF106Q9H2Y7 1883 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FN3KQ9H479 309 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MVB12BQ9H7P6 319 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SYNDIG1Q9H7V2 258 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CNOT10Q9H9A5 744 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CAB39LQ9H9S4 337 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RNPEPL1Q9HAU8 725 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 NGBQ9NPG2 151 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KLHL1Q9NR64 748 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FBXO8Q9NRD0 319 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 POT1Q9NUX5 634 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OLAHQ9NV23 265 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC39A1Q9NY26 324 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CNIH4Q9P003 139 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 HSPB7Q9UBY9 170 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TEKT2Q9UIF3 430 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 POMT2Q9UKY4 750 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PADI1Q9ULC6 663 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ERVK-11Q9UQG0 969 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RCE1Q9Y256 329 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ASF1AQ9Y294 204 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MRPS2Q9Y399 296 aaKnown RBP2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CLDN16Q9Y5I7 305 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KLK4Q9Y5K2 254 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 U3KQV3 271 aa2.38□□□□□ -2.03
TNFRSF1A-210ENST00000537842 PCM1Q15154 2024 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DOPEY2Q9Y3R5 2298 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM230AA0A1W2PPH8 454 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GSAPA4D1B5 854 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TLCD2A6NGC4 264 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WASHC1A8K0Z3 465 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TARM1B6A8C7 271 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MCIDASD6RGH6 385 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 K7ENP7 123 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 L7N2F9 121 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CLDN4O14493 209 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TO15178 435 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 P2RX6O15547 441 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF749O43361 778 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CYTIPO60759 359 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ATP6V1G1O75348 118 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ZNF189O75820 626 aaPredicted RBP2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RSL1D1O76021 490 aaKnown RBP2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WISP2O76076 250 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 STK17BO94768 372 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ACSL3O95573 720 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TTC4O95801 387 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 DDAH2O95865 285 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GAS8O95995 478 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ADAP00813 363 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KRT6BP04259 564 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KRT8P05787 483 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LCKP06239 509 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 UMODP07911 640 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CYC1P08574 325 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ABHD2P08910 425 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FAM58BPP0C7Q3 252 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC35G4P0C7Q5 338 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 OR56A5P0C7T3 313 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC35E2BP0CK96 405 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 RALBP11234 206 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 FGF5P12034 268 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 LIFP15018 202 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CD1DP15813 335 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 IL7RP16871 459 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ADRA2CP18825 462 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CD22P20273 847 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAGP20916 626 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MPGP29372 298 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 WNT5AP41221 380 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 MAGEA12P43365 314 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 GPR12P47775 334 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 KRT6CP48668 564 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 SLC9A3P48764 834 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 TRPC1P48995 793 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 CAMLGP49069 296 aa2.37□□□□□ -2.03
TNFRSF1A-210ENST00000537842 ARSFP54793 590 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms