RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 IRF3Q14653 427 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 MINDY4Q4G0A6 757 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 LINC00299Q6ZSB3 139 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 TMEM151BQ8IW70 566 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 TCEANCQ8N8B7 351 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 PTPMT1Q8WUK0 201 aaPredicted RBP12.39□□□□□ -0.43
BEST1-208ENST00000534553 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 SENP5Q96HI0 755 aaPredicted RBP12.39□□□□□ -0.43
BEST1-208ENST00000534553 GPA33Q99795 319 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 PRSS27Q9BQR3 290 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 RHNO1Q9BSD3 238 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 SLC7A5P2Q9GIP4 190 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 TGIF2Q9GZN2 237 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 CAPN10Q9HC96 672 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 DNAJB12Q9NXW2 375 aaKnown RBP12.39□□□□□ -0.43
BEST1-208ENST00000534553 TVP23BQ9NYZ1 205 aa12.39□□□□□ -0.43
BEST1-208ENST00000534553 DHCR7Q9UBM7 475 aaKnown RBP12.39□□□□□ -0.43
BEST1-208ENST00000534553 TNRC6BQ9UPQ9 1833 aaKnown RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 A0A0B4J2E0 115 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 A0A1B0GX12 115 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 OR6C76A6NM76 312 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 A8MU76 341 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 HRKO00198 91 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 ENTPD6O75354 484 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 BCL10O95999 233 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 THY1P04216 161 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 HMGN1P05114 100 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 HTR2AP28223 471 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 C21orf33P30042 268 aaPredicted RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 CTBP2P56545 445 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 HOXC5Q00444 222 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 RHAGQ02094 409 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 PRKCDQ05655 676 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 SNAPC1Q16533 368 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 KLHL22Q53GT1 634 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 ARHGAP22Q7Z5H3 698 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 BPHLQ86WA6 291 aaPredicted RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 BCORP1Q8N888 145 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 OR2T33Q8NG76 320 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 TMEM163Q8TC26 289 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 BRIX1Q8TDN6 353 aaKnown RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 IL4I1Q96RQ9 567 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 PRR14Q9BWN1 585 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 NAA50Q9GZZ1 169 aaKnown RBP12.38□□□□□ -0.43
BEST1-208ENST00000534553 GAREM1Q9H706 876 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 AMBNQ9NP70 447 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 TBC1D23Q9NUY8 699 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 SELENONQ9NZV5 590 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 CNIH4Q9P003 139 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.38□□□□□ -0.43
BEST1-208ENST00000534553 MED31Q9Y3C7 131 aa12.38□□□□□ -0.43
BEST1-208ENST00000534553 NPIPA5A0A0B4J1W7 369 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 A0A1W2PPW3 197 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 NPIPA7E9PJI5 369 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 M0R3G1 203 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 PRODHO43272 600 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SIGLEC6O43699 453 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 RCBTB2O95199 551 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 PDGFBP01127 241 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 CLPSP04118 112 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 IGKV3-11P04433 115 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 CFIP05156 583 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 STSP08842 583 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 GKN3PP0CG01 181 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 NPIPA8P0DM63 369 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 RFX3P48380 749 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TIGD6Q17RP2 521 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SLC16A12Q6ZSM3 486 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TMPRSS11FQ6ZWK6 438 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 ZNF614Q8N883 585 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 OR52L1Q8NGH7 329 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 RFKQ969G6 155 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TMEM80Q96HE8 168 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 LIN28AQ9H9Z2 209 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 UBQLN4Q9NRR5 601 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 PNO1Q9NRX1 252 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 ERGIC3Q9Y282 383 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 DTX4Q9Y2E6 619 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 IGLV3-12A0A075B6K2 115 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 LY6G6EA0A0G2JKS1 128 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SERINC4A6NH21 518 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 TLX2O43763 284 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 IL33O95760 270 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 CSTAP01040 98 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 IGKV1D-16P01601 117 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 SYPP08247 313 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 IGFBP1P08833 259 aaPredicted RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 ADORA3P0DMS8 318 aa12.37□□□□□ -0.43
BEST1-208ENST00000534553 DBTP11182 482 aaKnown RBP12.37□□□□□ -0.43
BEST1-208ENST00000534553 PRG2P13727 222 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms