RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CHMP6Q96FZ7 201 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 C16orf58Q96GQ5 468 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 WFIKKN1Q96NZ8 548 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 STACQ99469 402 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 MED18Q9BUE0 208 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 HOXD1Q9GZZ0 328 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 OPN3Q9H1Y3 402 aaPredicted RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 FANCFQ9NPI8 374 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 DUSP22Q9NRW4 184 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZCCHC3Q9NUD5 404 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 GIN1Q9NXP7 522 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 MCTS1Q9ULC4 181 aaKnown RBP11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 PROCRQ9UNN8 238 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 EMC9Q9Y3B6 208 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 TESMINQ9Y4I5 508 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 SNX8Q9Y5X2 465 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 ROS1P08922 2347 aa11.16□□□□□ -0.62
CAPRIN1-213ENST00000533562 A0A1W2PQD3 144 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 C7orf72A4D263 438 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 SHISA8B8ZZ34 492 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 CGAP01215 116 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 KRT16P08779 473 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 LAMP1P11279 417 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 FOSL1P15407 271 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 EFNA1P20827 205 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 PRPS1L1P21108 318 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 ATP6V1C1P21283 382 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 ME2P23368 584 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 EIF1P41567 113 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 CCT3P49368 545 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 CTBP2P56545 445 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 RAC1P63000 192 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 LASP1Q14847 261 aaKnown RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 XKR7Q5GH72 579 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 C6orf136Q5SQH8 315 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 PDSS1Q5T2R2 415 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 GTF2IRD2BQ6EKJ0 949 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 ESPNLQ6ZVH7 1005 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 GTF2IRD2Q86UP8 949 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 GGNQ86UU5 652 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF610Q8N9Z0 462 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 GATSQ8NAP1 163 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 FNDC5Q8NAU1 212 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 ZNF527Q8NB42 609 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR7A2PQ8NGA2 310 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR56A1Q8NGH5 318 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 B4GALNT2Q8NHY0 566 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 OR5P2Q8WZ92 322 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 PIGUQ9H490 435 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 GLRX2Q9NS18 164 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 MED17Q9NVC6 651 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 BEX4Q9NWD9 120 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 KLHL28Q9NXS3 571 aa11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 FAF1Q9UNN5 650 aaPredicted RBP11.15□□□□□ -0.62
CAPRIN1-213ENST00000533562 H3BNH8 94 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ADAMDEC1O15204 470 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 AQP8O94778 261 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 SYNGR4O95473 234 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 BPGMP07738 259 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 CD53P19397 219 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 IL11P20809 199 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 VSNL1P62760 191 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 GABPB1Q06547 395 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 FOXD4Q12950 439 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 MAD2L1Q13257 205 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 PTGR1Q14914 329 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 PLPPR5Q32ZL2 321 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 SPDYE7PQ495Y7 208 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 EXOSC6Q5RKV6 272 aaKnown RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 CCNJQ5T5M9 372 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 IL23RQ5VWK5 629 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 CDC73Q6P1J9 531 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 EMBQ6PCB8 327 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 BHLHB9Q6PI77 547 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZCCHC23Q6ZST2 131 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZAR1Q86SH2 424 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 OR10D3Q8NH80 312 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 PPP1R14CQ8TAE6 165 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ADAMTS15Q8TE58 950 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 CDS1Q92903 461 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 MOAP1Q96BY2 351 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 TUBGCP3Q96CW5 907 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 COQ8BQ96D53 544 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 SH3YL1Q96HL8 342 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 GMPPAQ96IJ6 420 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 C3orf30Q96M34 536 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ACTRT3Q9BYD9 372 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 SIRT3Q9NTG7 399 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 FBXO34Q9NWN3 711 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 ZDHHC2Q9UIJ5 367 aa11.14□□□□□ -0.63
CAPRIN1-213ENST00000533562 CFLARO15519 480 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 DIAPH2O60879 1101 aa11.13□□□□□ -0.63
CAPRIN1-213ENST00000533562 OPN1LWP04000 364 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms