RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 DUX1O43812 170 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 HYAL3O43820 417 aaPredicted RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 PDGFBP01127 241 aaPredicted RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 IGKV1D-16P01601 117 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 HSMCR30P0CW71 290 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 PCYT1AP49585 367 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 HSD11B2P80365 405 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 PLAURQ03405 335 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 SHBQ15464 509 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 DECR1Q16698 335 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 PDZK1Q5T2W1 519 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 PRPF38BQ5VTL8 546 aaKnown RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 AMER2Q8N7J2 671 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 OR8D4Q8NGM9 314 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 HOXB13Q92826 284 aaPredicted RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 VSTM2LQ96N03 204 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 LMF2Q9BU23 707 aaKnown RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 SLC25A19Q9HC21 320 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 DHCR7Q9UBM7 475 aaKnown RBP16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 A3GALT2U3KPV4 340 aa16.02■□□□□ 0.15
PCDHA6-202ENST00000527624 LOC100506127A0A0U1RQW1 187 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 PIPP12273 146 aaPredicted RBP16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 GLB1P16278 677 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 TGM1P22735 817 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 BNC1Q01954 994 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 TSPAN31Q12999 210 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 SOWAHCQ53LP3 525 aaPredicted RBP16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 NPSR1Q6W5P4 371 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 PLXDC1Q8IUK5 500 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 KBTBD8Q8NFY9 601 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 TEX47Q8TBZ9 253 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 OR5M11Q96RB7 305 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 CHRNA10Q9GZZ6 450 aa16.01■□□□□ 0.15
PCDHA6-202ENST00000527624 BLACEA4D250 179 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 DSCR3O14972 297 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 ZNF749O43361 778 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 PRKNO60260 465 aaPredicted RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 DBTP11182 482 aaKnown RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 CD40LGP29965 261 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 GPR3P46089 330 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 SMSP52788 366 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 HSD17B7P56937 341 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 CDK5Q00535 292 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 OR1Q1Q15612 314 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 MBOAT2Q6ZWT7 520 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 GATAD2AQ86YP4 633 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 OR1L3Q8NH93 324 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 Q96MT0 163 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 ELF4Q99607 663 aaPredicted RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 MGLLQ99685 303 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 CENPOQ9BU64 300 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 NXF2Q9GZY0 626 aaKnown RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 RNF167Q9H6Y7 350 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 FSCN3Q9NQT6 498 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 H0YIG0 161 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 H3BMH7 237 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 PRAMEF2O60811 474 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 FOLR1P15328 257 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 GNSP15586 552 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 MED22Q15528 200 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 SNAPC1Q16533 368 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 TMEM201Q5SNT2 666 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 MFSD4BQ5TF39 518 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 LYSMD4Q5XG99 296 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 C19orf48Q6RUI8 117 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 WDR88Q6ZMY6 472 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 RCBTB1Q8NDN9 531 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 C16orf52Q8NHV5 167 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 CNOT9Q92600 299 aaKnown RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 CHCHD6Q9BRQ6 235 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 CDADC1Q9BWV3 514 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 POLDIP3Q9BY77 421 aaKnown RBP16■□□□□ 0.15
PCDHA6-202ENST00000527624 IL20RAQ9UHF4 553 aa16■□□□□ 0.15
PCDHA6-202ENST00000527624 TRAPPC13A5PLN9 417 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 AGRPO00253 132 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 ARRB1P49407 418 aaPredicted RBP15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 ZNF91Q05481 1191 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 SLC27A4Q6P1M0 643 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 PLEKHG7Q6ZR37 379 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 RASSF6Q6ZTQ3 369 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 CLIP3Q96DZ5 547 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 LRR1Q96L50 414 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 PTCHD1Q96NR3 888 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 PRSS27Q9BQR3 290 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 NUDT22Q9BRQ3 303 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 TSSK6Q9BXA6 273 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 OR10A5Q9H207 317 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 ERVMER34-1Q9H9K5 563 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 CCDC59Q9P031 241 aaKnown RBP15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 GPR52Q9Y2T5 361 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 CSNK1G3Q9Y6M4 447 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 TP53BP1Q12888 1972 aaPredicted RBP15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 UNC13CQ8NB66 2214 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 FPR3P25089 353 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 SYT14P1Q58G82 188 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 TUBA3EQ6PEY2 450 aa15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 WDR36Q8NI36 951 aaKnown RBP15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 C6orf62Q9GZU0 229 aaPredicted RBP15.99■□□□□ 0.15
PCDHA6-202ENST00000527624 POLE3Q9NRF9 147 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms