RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 KLF13Q9Y2Y9 288 aaPredicted RBP16.28■□□□□ 0.2
SDC2-205ENST00000520233 WIF1Q9Y5W5 379 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 PTPRQQ9UMZ3 2332 aa16.28■□□□□ 0.2
SDC2-205ENST00000520233 SERPINA1P01009 418 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 CSTAP01040 98 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 CD247P20963 164 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 KCNJ5P48544 419 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 C17orf67Q0P5P2 114 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 EIPR1Q53HC9 387 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 CYBRD1Q53TN4 286 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 MRPL2Q5T653 305 aaKnown RBP16.27■□□□□ 0.2
SDC2-205ENST00000520233 CBLL1Q75N03 491 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 EIF3MQ7L2H7 374 aaKnown RBP16.27■□□□□ 0.2
SDC2-205ENST00000520233 EID3Q8N140 333 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 RBMXL3Q8N7X1 1067 aaKnown RBP16.27■□□□□ 0.2
SDC2-205ENST00000520233 GATSQ8NAP1 163 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 SMYD1Q8NB12 490 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 PHOSPHO1Q8TCT1 267 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 TMEM41AQ96HV5 264 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 RAB3IPQ96QF0 476 aaPredicted RBP16.27■□□□□ 0.2
SDC2-205ENST00000520233 FAM173AQ9BQD7 235 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 DOHHQ9BU89 302 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 HES7Q9BYE0 225 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 KLHL1Q9NR64 748 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 DEPPQ9NTK1 212 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 DCAF13Q9NV06 445 aaKnown RBP16.27■□□□□ 0.2
SDC2-205ENST00000520233 OLAHQ9NV23 265 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 RPS6KA6Q9UK32 745 aa16.27■□□□□ 0.2
SDC2-205ENST00000520233 C2orf72A6NCS6 295 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 CLDN24A6NM45 220 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 G3V3Y1 287 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 KLRC4-KLRK1H3BQV0 150 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 ERVH48-1M5A8F1 160 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 GTPBP1O00178 669 aaKnown RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 PEX1O43933 1283 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 TPST1O60507 370 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 TRIM3O75382 744 aaPredicted RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 C8BP07358 591 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 UBL4AP11441 157 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 SFTPCP11686 197 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 NQO1P15559 274 aaKnown RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 ATP6V1B2P21281 511 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 DNASE1L1P49184 302 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 RNF144AP50876 292 aaPredicted RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 SELENOWP63302 87 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 ZNF169Q14929 603 aaPredicted RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 DUSP7Q16829 419 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 MTX3Q5HYI7 312 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 CYP2R1Q6VVX0 501 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 GALNTL5Q7Z4T8 443 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 PACS2Q86VP3 889 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 SPPL2CQ8IUH8 684 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 GRAMD2AQ8IUY3 354 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 SULF2Q8IWU5 870 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 EXD3Q8N9H8 876 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 OR2M7Q8NG81 312 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 GPR32P1Q8NGA4 272 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 LZICQ8WZA0 190 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 TRIM15Q9C019 465 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 BAG5Q9UL15 447 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 SAMD4AQ9UPU9 718 aaKnown RBP16.26■□□□□ 0.19
SDC2-205ENST00000520233 CHST2Q9Y4C5 530 aa16.26■□□□□ 0.19
SDC2-205ENST00000520233 DMXL2Q8TDJ6 3036 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 IGLV3-32A0A0A0MS00 114 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 CDHR4A6H8M9 788 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 CFAP73A6NFT4 308 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 TMEM229AB2RXF0 380 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 SYT5O00445 386 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 ZNF264O43296 627 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 SUV39H1O43463 412 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 EIF4E2O60573 245 aaKnown RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 CIB2O75838 187 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 GPR85P60893 370 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 PLAURQ03405 335 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 FLOT2Q14254 428 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 CLIP4Q8N3C7 705 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 FAM71CQ8NEG0 241 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 DUSP19Q8WTR2 217 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 CNOT9Q92600 299 aaKnown RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 POP5Q969H6 163 aaKnown RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 SLC35B4Q969S0 331 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 LRGUKQ96M69 825 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 LAT2Q9GZY6 243 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 EVA1AQ9H8M9 152 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 EXOSC3Q9NQT5 275 aaKnown RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 ZNF71Q9NQZ8 489 aaPredicted RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 RLIMQ9NVW2 624 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 KLHL28Q9NXS3 571 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 DNAJB12Q9NXW2 375 aaKnown RBP16.25■□□□□ 0.19
SDC2-205ENST00000520233 PPP4R1LQ9P1A2 415 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 B3GNT3Q9Y2A9 372 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 ZFHX4Q86UP3 3567 aa16.25■□□□□ 0.19
SDC2-205ENST00000520233 A0A0G2JMM0 328 aa16.24■□□□□ 0.19
SDC2-205ENST00000520233 A0A1W2PPB8 328 aa16.24■□□□□ 0.19
SDC2-205ENST00000520233 A0A1W2PRS3 328 aa16.24■□□□□ 0.19
SDC2-205ENST00000520233 KIR3DP1A8MWS1 328 aa16.24■□□□□ 0.19
SDC2-205ENST00000520233 SNPHO15079 494 aa16.24■□□□□ 0.19
SDC2-205ENST00000520233 ZNF682O95780 498 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms