RNA–Protein interactions for RNA: ENST00000514183.5

RACK1-231, Transcript of receptor for activated C kinase 1, human

TSL 2

Gene RACK1, Length 1,439 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-231	ENST00000514183	TMEM179B	Q7Z7N9	219 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	CARM1	Q86X55	608 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	HIPK1	Q86Z02	1210 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	ARMC8	Q8IUR7	673 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	CHERP	Q8IWX8	916 aa	Known RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	HS3ST5	Q8IZT8	346 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	LGI4	Q8N135	537 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	OR2L13	Q8N349	312 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	METTL27	Q8N6F8	245 aa	Predicted RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	METTL25	Q8N6Q8	603 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	SMYD1	Q8NB12	490 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	OR7G2	Q8NG99	324 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	OR2T29	Q8NH02	315 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	BBS10	Q8TAM1	723 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	MIPOL1	Q8TD10	442 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	DOK4	Q8TEW6	326 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	CYGB	Q8WWM9	190 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	GEMIN6	Q8WXD5	167 aa	Known RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	TFAP2C	Q92754	450 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	TANK	Q92844	425 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	ZNF837	Q96EG3	531 aa	Predicted RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	MS4A4E	Q96PG1	132 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	RSRP1	Q9BUV0	290 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	ADI1	Q9BV57	179 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	SPRTN	Q9H040	489 aa	Predicted RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	ANKRA2	Q9H9E1	313 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	SMURF2	Q9HAU4	748 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	EQTN	Q9NQ60	294 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	SMPD3	Q9NY59	655 aa	Predicted RBP	6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	USE1	Q9NZ43	259 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	ABI3	Q9P2A4	366 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	PTGFRN	Q9P2B2	879 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	TEKT2	Q9UIF3	430 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	NTNG1	Q9Y2I2	539 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183		U3KQV3	271 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	GTF3C1	Q12789	2109 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	NF1	P21359	2839 aa		6.17	□□□□□ -1.42
RACK1-231	ENST00000514183	NIPBL	Q6KC79	2804 aa	eCLIP	6.17	□□□□□ -1.42	2e-13	■■■□□ 15.5
RACK1-231	ENST00000514183	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	FITM1	A5D6W6	292 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	PRAMEF25	A6NGN4	478 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ASNA1	O43681	348 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	HS6ST1	O60243	411 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OR10H2	O60403	315 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	MFN2	O95140	757 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	NSA2	O95478	260 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CLDN14	O95500	239 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	SNAP29	O95721	258 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ATP1B1	P05026	303 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ALPL	P05186	524 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CHRM4	P08173	479 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	RNH1	P13489	461 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CD247	P20963	164 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	FPR1	P21462	350 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	PRKACG	P22612	351 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CAPG	P40121	348 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OR1E2	P47887	323 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	AVPR1B	P47901	424 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GTF2A1	P52655	376 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CRISP3	P54108	245 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	MAT1A	Q00266	395 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	FUT5	Q11128	374 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GNA13	Q14344	377 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GRM7	Q14831	915 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	LAPTM4A	Q15012	233 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	FAM214A	Q32MH5	1076 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	SLC36A3	Q495N2	470 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GPAT3	Q53EU6	434 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ZNF385C	Q66K41	422 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ANKRD34A	Q69YU3	496 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	MFSD12	Q6NUT3	480 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	NIPAL1	Q6NVV3	410 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OLIG3	Q7RTU3	272 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	PPP1R32	Q7Z5V6	425 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	TSEN54	Q7Z6J9	526 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	DHRSX	Q8N5I4	330 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GPR32P1	Q8NGA4	272 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OR1N1	Q8NGS0	311 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ADAMTS18	Q8TE60	1221 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	HAS2	Q92819	552 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ANKRD9	Q96BM1	317 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	RNF31	Q96EP0	1072 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	MMAB	Q96EY8	250 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GIMAP5	Q96F15	307 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	PEX11G	Q96HA9	241 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	CCDC120	Q96HB5	630 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	FBXL20	Q96IG2	436 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	EAF1	Q96JC9	268 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	COL21A1	Q96P44	957 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OR7D2	Q96RA2	312 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ZNF347	Q96SE7	839 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ZNF607	Q96SK3	696 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	RBM4B	Q9BQ04	359 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	TREX2	Q9BQ50	279 aa	Predicted RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	RBM4	Q9BWF3	364 aa	Known RBP	6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	OSBPL10	Q9BXB5	764 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ACTRT3	Q9BYD9	372 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	ANKRD60	Q9BZ19	345 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	GABARAPL1	Q9H0R8	117 aa		6.16	□□□□□ -1.42
RACK1-231	ENST00000514183	SLC26A1	Q9H2B4	701 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms