RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GGNQ86UU5 652 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 MISPQ8IVT2 679 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 GTPBP8Q8N3Z3 284 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 OR10D3Q8NH80 312 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 OR2W6PQ8NHA6 318 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 B4GALNT2Q8NHY0 566 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 AGR3Q8TD06 166 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 HOXB13Q92826 284 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 PIGTQ969N2 578 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ZBTB8AQ96BR9 441 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 APOPT1Q96IL0 206 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 PPP3R2Q96LZ3 170 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 RNF145Q96MT1 663 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ZNF395Q9H8N7 513 aaPredicted RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
TPM3-219ENST00000509409 MED17Q9NVC6 651 aa13.81□□□□□ -0.2
TPM3-219ENST00000509409 ACANP16112 2415 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 TNFSF11O14788 317 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 SIAH2O43255 324 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 SPAG7O75391 227 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 SLU7O95391 586 aaKnown RBP13.8□□□□□ -0.2
TPM3-219ENST00000509409 ATP6V1C1P21283 382 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 FPR1P21462 350 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 RPL3P39023 403 aaKnown RBP13.8□□□□□ -0.2
TPM3-219ENST00000509409 IFFO1Q0D2I5 559 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 LASP1Q14847 261 aaKnown RBP13.8□□□□□ -0.2
TPM3-219ENST00000509409 SPDYE7PQ495Y7 208 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 HBMQ6B0K9 141 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 GTF2IRD2BQ6EKJ0 949 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 BIVMQ86UB2 503 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 GTF2IRD2Q86UP8 949 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 OR7A2PQ8NGA2 310 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 OR6K3Q8NGY3 331 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 OR2V1Q8NHB1 315 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 ACTRT2Q8TDY3 377 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.8□□□□□ -0.21e-8■■■■■ 76.2
TPM3-219ENST00000509409 FAM120BQ96EK7 910 aaKnown RBP13.8□□□□□ -0.2
TPM3-219ENST00000509409 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
TPM3-219ENST00000509409 C18orf12Q96KH6 178 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 CCL19Q99731 98 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 NPAS1Q99742 590 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 MECRQ9BV79 373 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 BTBD2Q9BX70 525 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 TMEM185BQ9H7F4 350 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 FANCFQ9NPI8 374 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 PLSCR4Q9NRQ2 329 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 GIMAP2Q9UG22 337 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 ATP6V1HQ9UI12 483 aa13.8□□□□□ -0.2
TPM3-219ENST00000509409 SCAMP2O15127 329 aaKnown RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 HSPA4LO95757 839 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 NUDT14O95848 222 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 CARD18P57730 90 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 PLPPR5Q32ZL2 321 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 UGT3A2Q3SY77 523 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 ATP6AP1LQ52LC2 224 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 ZCCHC23Q6ZST2 131 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 ESPNLQ6ZVH7 1005 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 Q71RC1 249 aaPredicted RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 CXorf67Q86X51 503 aaPredicted RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 PHOSPHO1Q8TCT1 267 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 OR5P2Q8WZ92 322 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 OSTF1Q92882 214 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 CDS1Q92903 461 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 REXO5Q96IC2 774 aaKnown RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 PRPF18Q99633 342 aaKnown RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 SMR3AQ99954 134 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
TPM3-219ENST00000509409 FAF1Q9UNN5 650 aaPredicted RBP13.79□□□□□ -0.2
TPM3-219ENST00000509409 A0A0J9YW62 118 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 H3BNH8 94 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 GTPBP1O00178 669 aaKnown RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 ADAMDEC1O15204 470 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 SS18L1O75177 396 aaPredicted RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 INHBBP09529 407 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 LAMP1P11279 417 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 CCKARP32238 428 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 SFTPDP35247 375 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 CCT3P49368 545 aaKnown RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 RNF144AP50876 292 aaPredicted RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 TP53BP2Q13625 1128 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 MLC1Q15049 377 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 GUSBP1Q15486 140 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 LSM12Q3MHD2 195 aaKnown RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 Q5PR19 223 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 IL23RQ5VWK5 629 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 CLEC9AQ6UXN8 241 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 STK32CQ86UX6 486 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 TRABD2AQ86V40 505 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 LILRA2Q8N149 483 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 RIBC1Q8N443 379 aaPredicted RBP13.78□□□□□ -0.2
TPM3-219ENST00000509409 FNDC5Q8NAU1 212 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 ZNF527Q8NB42 609 aa13.78□□□□□ -0.2
TPM3-219ENST00000509409 POC1BQ8TC44 478 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms