RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 TMEM139Q8IV31 216 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 PDPRQ8NCN5 879 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 SLC44A1Q8WWI5 657 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 CCT6BQ92526 530 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 RIT1Q92963 219 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 LRRC39Q96DD0 335 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF503Q96F45 646 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 CMTM7Q96FZ5 175 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 PGM2Q96G03 612 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 CERS2Q96G23 380 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 JSRP1Q96MG2 331 aaPredicted RBP3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 F2RL3Q96RI0 385 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 OSBPL9Q96SU4 736 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 BAG1Q99933 345 aaPredicted RBP3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 CENPKQ9BS16 269 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 MED18Q9BUE0 208 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 SPATA5L1Q9BVQ7 753 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 OSBPL11Q9BXB4 747 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 ERVK-6Q9BXR3 956 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 REG4Q9BYZ8 158 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 TRIM5Q9C035 493 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 AMBRA1Q9C0C7 1298 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 DERL2Q9GZP9 239 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 RNF122Q9H9V4 155 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 CXorf21Q9HAI6 301 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 GALNT9Q9HCQ5 603 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 FANCFQ9NPI8 374 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 DNAJC11Q9NVH1 559 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 TEX10Q9NXF1 929 aaPredicted RBP3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 IKZF3Q9UKT9 509 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 ERVK-19Q9WJR5 959 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF175Q9Y473 711 aa3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 SONP18583 2426 aaKnown RBP3.9□□□□□ -1.79
CALCOCO2-213ENST00000509112 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR6C70A6NIJ9 312 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF785A8K8V0 405 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 A8MV72 311 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TAPBPO15533 448 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR10H2O60403 315 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 UGDHO60701 494 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ICOSLGO75144 302 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 STK16O75716 305 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 PRSS23O95084 383 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GPANK1O95872 356 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ALDOAP04075 364 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 F7P08709 466 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 DANCRP0C864 163 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 FCGR2AP12318 317 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 EPORP19235 508 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 CD22P20273 847 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 S1PR1P21453 382 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TBXA2RP21731 343 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 DRD5P21918 477 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GPX3P22352 226 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SSR2P43308 183 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ANXA11P50995 505 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 DSCR9P59020 149 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ATP6V0D1P61421 351 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 RPS7P62081 194 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 RPS13P62277 151 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 IRF8Q02556 426 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 BTKQ06187 659 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SLAMF1Q13291 335 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 FOXE3Q13461 319 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 CUL3Q13618 768 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GANABQ14697 944 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 PDK4Q16654 411 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GLYR1Q49A26 553 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 C10orf62Q5T681 223 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 RNASEH2BQ5TBB1 312 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 STEAP4Q687X5 459 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SFRP4Q6FHJ7 346 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR52E8Q6IFG1 317 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 MED27Q6P2C8 311 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 VWA1Q6PCB0 445 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ANGPTL8Q6UXH0 198 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF704Q6ZNC4 412 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 FRA10AC1Q70Z53 315 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 SSX8Q7RTT4 187 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 LRRC70Q7Z2Q7 622 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TBC1D1Q86TI0 1168 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 YRDCQ86U90 279 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GAS2L3Q86XJ1 694 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 PLCZ1Q86YW0 608 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GRAMD2AQ8IUY3 354 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 WDSUB1Q8N9V3 476 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 OR6K3Q8NGY3 331 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GRK7Q8WTQ7 553 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 UBTD2Q8WUN7 234 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 PPWD1Q96BP3 646 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TMCO6Q96DC7 493 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ERP27Q96DN0 273 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 C11orf24Q96F05 449 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 MARS2Q96GW9 593 aaKnown RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 ZNF845Q96IR2 970 aaPredicted RBP3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 GAL3ST4Q96RP7 486 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 KRT12Q99456 494 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 EGFL8Q99944 293 aa3.89□□□□□ -1.79
CALCOCO2-213ENST00000509112 TMEM79Q9BSE2 394 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms